Pre_GI Gene

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Host: NC_015761 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015761:2726000 Salmonella bongori NCTC 12419, complete genome

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27260792726423345hypothetical proteinBLASTP
27266032727520918iron transport periplasmic-binding proteinQuickGO ontologyBLASTP
27275172728338822iron transport ATP-binding proteinQuickGO ontologyBLASTP
27283352729195861iron transport inner membrane proteinQuickGO ontologyBLASTP
27291862730034849iron transport inner membrane proteinQuickGO ontologyBLASTP
27301352731034900effector proteinQuickGO ontologyBLASTP
27312142731969756AraC family transcriptional regulatorQuickGO ontologyBLASTP
27323282733215888AraC family transcriptional regulatorQuickGO ontologyBLASTP
27335592734011453hypothetical proteinBLASTP
27340262734697672cell invasion proteinQuickGO ontologyBLASTP
27346542735253600cell invasion proteinQuickGO ontologyBLASTP
27352252735983759pathogenicity 1 island effector proteinQuickGO ontologyBLASTP
27359802736285306pathogenicity 1 island effector proteinQuickGO ontologyBLASTP
27363042736546243pathogenicity 1 island effector proteinQuickGO ontologyBLASTP
273657127377491179pathogenicity 1 island effector proteinQuickGO ontologyBLASTP
27380662738995930AraC family transcriptional regulatorQuickGO ontologyBLASTP
274010927417701662invasion protein regulatorQuickGO ontologyBLASTP
27417882742270483cell invasion proteinQuickGO ontologyBLASTP
27432392743631393virulence associated chaperoneQuickGO ontologyBLASTP
27439642744212249acyl carrier proteinQuickGO ontologyBLASTP
274422727463442118pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
274636327473851023pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
274745627486851230pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
274871327504941782pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
27504972750994498hypothetical proteinBLASTP
275113227522021071virulence associated secretory proteinQuickGO ontologyBLASTP
27521892752980792virulence associated secretory proteinQuickGO ontologyBLASTP
27529842753244261virulence associated secretory proteinQuickGO ontologyBLASTP