Pre_GI: BLASTP Hits

Some Help

Query: NC_013198:394000:433309 Lactobacillus rhamnosus GG, complete genome

Start: 433309, End: 434136, Length: 828

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009848:3631243:364348136434813644311831Bacillus pumilus SAFR-032, complete genomecobalt ABC transporter5e-70264
NC_013216:2078444:209876820987682099700933Desulfotomaculum acetoxidans DSM 771, complete genomecobalt transport protein3e-1685.9
NC_010001:4486170:448617044861704486982813Clostridium phytofermentans ISDg, complete genomecobalt transport protein3e-1582.4
NC_014960:1735786:174429617442961745150855Anaerolinea thermophila UNI-1, complete genomeputative cobalt transport protein5e-1581.6
NC_014964:923681:925414925414926172759Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completecobalt transport protein4e-1375.1
NC_008262:2598920:259892025989202599726807Clostridium perfringens SM101, complete genomeABC transporter permease protein2e-1273.2
NC_003366:2731995:273388727338872734693807Clostridium perfringens str. 13, complete genomehypothetical protein2e-1273.2
NC_013893:830282:851776851776852582807Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTransmembrane component of general energizing module of ECF transporters4e-1272.4
NC_017353:825856:847350847350848156807Staphylococcus lugdunensis N920143, complete genomeputative cobalt transport protein4e-1272.4
NC_010723:223935:269153269153269956804Clostridium botulinum E3 str. Alaska E43, complete genomecobalt ABC transporter, permease protein3e-1272.4
NC_008148:1859888:191729519172951918029735Rubrobacter xylanophilus DSM 9941, complete genomecobalt transport protein7e-1271.2
NC_017342:1012555:103528910352891036095807Staphylococcus aureus subsp. aureus TCH60 chromosome, completecobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein1e-1170.5
NC_007622:2239799:224169522416952242501807Staphylococcus aureus RF122, complete genomeprobable cobalt transport protein4e-1168.6
NC_017337:2319847:232133123213312322137807Staphylococcus aureus subsp. aureus ED133 chromosome, completecobalt transport protein4e-1168.6
NC_017338:2296906:229771422977142298520807Staphylococcus aureus subsp. aureus JKD6159 chromosome, completecobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein4e-1168.6
NC_016941:2234937:223642222364222237228807Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative cobalt transport protein4e-1168.6
NC_002976:1844901:184570818457081846514807Staphylococcus epidermidis RP62A, complete genomecobalt transport family protein4e-1168.6
NC_016928:2249907:225139222513922252198807Staphylococcus aureus subsp. aureus M013 chromosome, completetransmembrane component of general energizingmodule of ECF transporters1e-1067.4
NC_004461:1849176:185068118506811851487807Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein1e-1067
NC_017341:2384736:238663323866332387439807Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein2e-1066.6
NC_017347:2350802:235269923526992353505807Staphylococcus aureus subsp. aureus T0131 chromosome, completeCobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein2e-1066.6
NC_016148:698388:714433714433715245813Thermovirga lienii DSM 17291 chromosome, complete genomecobalt transport protein2e-1066.6
NC_002953:2282236:228223622822362283042807Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative cobalt transport protein2e-1066.6
NC_003923:2301234:230313123031312303937807Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-1066.6
NC_017351:2335753:233765023376502338456807Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeenergy-coupling factor transporter transmembrane protein EcfT2e-1066.6
NC_009782:2362000:236286423628642363670807Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein3e-1066.2
NC_002951:2288674:229057122905712291377807Staphylococcus aureus subsp. aureus COL, complete genomecobalt transport family protein3e-1066.2
NC_002745:2289829:229172622917262292532807Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein3e-1066.2
NC_007795:2299327:230122423012242302030807Staphylococcus aureus subsp. aureus NCTC 8325, complete genomecobalt transport protein, putative3e-1066.2
NC_002758:2359329:236122623612262362032807Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to cobalt transport protein3e-1066.2
NC_014011:655266:682097682097682909813Aminobacterium colombiense DSM 12261 chromosome, complete genomecobalt transport protein3e-1066.2
NC_007793:2352953:235443823544382355244807Staphylococcus aureus subsp. aureus USA300, complete genomecobalt transport family protein3e-1066.2
NC_010079:2352691:235458823545882355394807Staphylococcus aureus subsp. aureus USA300_TCH1516, completecobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein3e-1066.2
NC_009487:2390713:239152123915212392327807Staphylococcus aureus subsp. aureus JH9 chromosome, completecobalt transport protein3e-1066.2
NC_007350:692041:714933714933715739807Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,putative ABC-type cobalt transport system permease component2e-1066.2
NC_017343:2212780:221467722146772215483807Staphylococcus aureus subsp. aureus ECT-R 2, complete genomecobalt transport family protein3e-1066.2
NC_016912:2170615:217251221725122173318807Staphylococcus aureus subsp. aureus VC40 chromosome, completecobalt transport family protein3e-1066.2
NC_013450:2306431:230791623079162308722807Staphylococcus aureus subsp. aureus ED98, complete genomecobalt transport family protein3e-1066.2
NC_009641:2357468:235895323589532359759807Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein3e-1066.2
NC_009632:2391397:239139723913972392203807Staphylococcus aureus subsp. aureus JH1 chromosome, completecobalt transport protein3e-1066.2
NC_020164:701151:723559723559724365807Staphylococcus warneri SG1, complete genomeTransmembrane component of general energizing module of ECF transporters3e-1065.9
NC_015573:2187688:219501421950142195928915Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter integral membrane protein3e-1065.9
NC_014960:72737:908929089291761870Anaerolinea thermophila UNI-1, complete genomeputative cobalt ABC transporter permease protein4e-1065.5
NC_014393:4482896:448430544843054485111807Clostridium cellulovorans 743B chromosome, complete genomecobalt transport protein4e-1065.5
NC_012563:3956500:395734539573453958148804Clostridium botulinum A2 str. Kyoto, complete genomecobalt transport permease, CbiQ family6e-1065.1
NC_009495:3688138:368943636894363690239804Clostridium botulinum A str. ATCC 3502 chromosome, complete genomecobalt ABC transporter permease6e-1065.1
NC_009697:3659834:366542536654253666228804Clostridium botulinum A str. ATCC 19397 chromosome, completecobalt ABC transporter permease6e-1065.1
NC_009698:3553365:356253435625343563337804Clostridium botulinum A str. Hall chromosome, complete genomecobalt ABC transporter permease6e-1065.1
NC_007168:813957:836936836936837742807Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein6e-1065.1
NC_014328:4387303:442850344285034429312810Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cobalt ABC transporter permease6e-1064.7
NC_012658:3778822:378012037801203780923804Clostridium botulinum Ba4 str. 657 chromosome, complete genomecobalt transport permease1e-0963.9
NC_010516:3759136:376043437604343761237804Clostridium botulinum B1 str. Okra, complete genomecobalt transport permease, CbiQ family1e-0963.5
NC_009699:3790917:379221537922153793018804Clostridium botulinum F str. Langeland chromosome, complete genomecobalt ABC transporter permease1e-0963.5
NC_017297:3787191:379082937908293791632804Clostridium botulinum F str. 230613 chromosome, complete genomecobalt transport permease, CbiQ family1e-0963.5
NC_012121:1728913:172972117297211730497777Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein1e-0963.5
NC_018665:139646:141318141318142109792Exiguobacterium antarcticum B7 chromosome, complete genomeEnergy-coupling factor transporter transmembrane protein EcfT2e-0963.2
NC_018664:2357882:235708623570862357889804Clostridium acidurici 9a chromosome, complete genomecobalt transporter permease protein CbiQ2e-0963.2
NC_014377:112992:144369144369145166798Thermosediminibacter oceani DSM 16646 chromosome, complete genomecobalt transport protein3e-0962.8
NC_006270:4014000:403312440331244033858735Bacillus licheniformis ATCC 14580, complete genomeCobalt transport protein3e-0962.8
NC_012673:1540000:155862615586261559417792Exiguobacterium sp. AT1b, complete genomecobalt transport protein2e-0962.8
NC_010556:141374:141374141374142165792Exiguobacterium sibiricum 255-15, complete genomecobalt transport protein3e-0962.4
NC_011999:198769:219460219460220257798Macrococcus caseolyticus JCSC5402, complete genomecobalt ABC transporter permease protein homolog8e-0961.2
NC_015391:2523451:253130525313052532102798Carnobacterium sp. 17-4 chromosome, complete genomeputative permease8e-0961.2
NC_010080:1911932:193783519378351938626792Lactobacillus helveticus DPC 4571, complete genomehypothetical protein1e-0860.8
NC_010520:3788702:379000037900003790803804Clostridium botulinum A3 str. Loch Maree, complete genomecobalt transport permease, CbiQ family1e-0860.5
NC_013316:120759:123965123965124672708Clostridium difficile R20291, complete genomeABC transporter, permease protein2e-0860.1
NC_014833:1045180:105650210565021057308807Ruminococcus albus 7 chromosome, complete genomecobalt transport protein2e-0859.7
NC_014624:3741764:374176437417643742585822Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0859.7
NC_008942:27436:308863088631653768Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-0859.7
NC_009089:117980:120122120122120925804Clostridium difficile 630, complete genomeABC transporter, permease protein2e-0859.7
NC_008555:2597980:261230026123002613100801Listeria welshimeri serovar 6b str. SLCC5334, complete genomecobalt transport protein3e-0859.3
NC_017208:108134:146372146372147166795Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecobalt transport protein cbiQ4e-0858.5
NC_021182:4557608:455845045584504559250801Clostridium pasteurianum BC1, complete genomeABC-type cobalt transport system, permease component CbiQ4e-0858.5
NC_014727:368698:371913371913372710798Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ABC cobalt transporter permease transporter7e-0858.2
NC_017295:3250451:325119832511983252001804Clostridium acetobutylicum EA 2018 chromosome, complete genomepermease (Cobalt permease subfamily)7e-0858.2
NC_007929:1463295:147967614796761480470795Lactobacillus salivarius subsp. salivarius UCC118, complete genomeCobalt transport permease protein6e-0858.2
NC_014171:109280:144324144324145118795Bacillus thuringiensis BMB171 chromosome, complete genomecobalt transport protein CbiQ7e-0857.8
NC_003030:3251941:325194132519413252744804Clostridium acetobutylicum ATCC 824, complete genomePredicted permease (Cobalt permease subfamily)8e-0857.8
NC_015687:3252233:325356832535683254371804Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobalt subfamily permease8e-0857.8
NC_015555:327562:369858369858370673816Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit1e-0757.4
NC_013192:305478:305478305478306233756Leptotrichia buccalis DSM 1135, complete genomecobalt transport protein1e-0757.4
NC_014921:777047:778095778095778961867Mycoplasma fermentans M64 chromosome, complete genomecobalt abc transporter, permease protein1e-0757
NC_014829:133305:173406173406174206801Bacillus cellulosilyticus DSM 2522 chromosome, complete genomecobalt transport protein1e-0757
NC_019970:336472:401178401178401984807Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type cobalt transport system, permease component CbiQ2e-0756.6
NC_014410:403776:446058446058446864807Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,cobalt transport protein2e-0756.6
NC_009515:705911:730781730781731500720Methanobrevibacter smithii ATCC 35061, complete genomecobalt ABC transporter, permease component, CbiQ2e-0756.2
NC_020995:245671:268621268621269418798Enterococcus casseliflavus EC20, complete genomecobalt transporter3e-0756.2
NC_006055:140686:164505164505165503999Mesoplasma florum L1, complete genomecobalt ABC transporter permease component3e-0755.8
NC_013161:1801904:182408118240811824956876Cyanothece sp. PCC 8802, complete genomecobalt transport protein4e-0755.5
NC_016938:136331:155546155546156343798Melissococcus plutonius DAT561 chromosome 1, complete genomecobalt transport family protein5e-0755.5
NC_004557:2711702:272991327299132730710798Clostridium tetani E88, complete genomecobalt transport protein cbiQ5e-0755.1
NC_015519:197836:230476230476231270795Tepidanaerobacter sp. Re1 chromosome, complete genomeABC transporter integral membrane subunit7e-0754.7
NC_013895:1332832:134584913458491346580732Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completecobalt transport protein7e-0754.7
NC_012658:2138791:215822121582212158976756Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative ABC transporter permease8e-0754.3
NC_020134:2801199:280423928042392805042804Clostridium stercorarium subsp. stercorarium DSM 8532, completecobalt transporter permease protein CbiQ1e-0653.9
NC_009697:2012500:203213620321362032861726Clostridium botulinum A str. ATCC 19397 chromosome, completeABC transporter permease1e-0653.9
NC_009698:2012500:203235520323552033080726Clostridium botulinum A str. Hall chromosome, complete genomeABC transporter permease1e-0653.9
NC_010516:2093901:211140621114062112161756Clostridium botulinum B1 str. Okra, complete genomeputative ABC transporter, permease protein1e-0653.9
NC_009699:2142177:216164921616492162404756Clostridium botulinum F str. Langeland chromosome, complete genomeABC transporter permease1e-0653.9
NC_017297:2143000:216174921617492162504756Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter permease1e-0653.9
NC_012563:2230403:225015122501512250906756Clostridium botulinum A2 str. Kyoto, complete genomeputative ABC transporter, permease protein2e-0653.1
NC_014364:1263427:127086112708611271658798Spirochaeta smaragdinae DSM 11293 chromosome, complete genomecobalt transport protein2e-0653.1
NC_020164:1784223:178620717862071787013807Staphylococcus warneri SG1, complete genometransmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for hydroxymethylPyrimidine3e-0652.8
NC_013174:73948:100919100919101695777Jonesia denitrificans DSM 20603, complete genomecobalt transport protein3e-0652.8
NC_015958:2251619:227731622773162278122807Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeABC transporter integral membrane subunit3e-0652.4
NC_015516:131564:154142154142154462321Melissococcus plutonius ATCC 35311, complete genomeECF transporter transmembrane protein5e-0652
NC_014538:1975385:199218719921871992993807Thermoanaerobacter sp. X513 chromosome, complete genomecobalt transport protein4e-0652
NC_014964:388458:431069431069431875807Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completecobalt transport protein4e-0652
NC_010320:918532:921591921591922397807Thermoanaerobacter sp. X514 chromosome, complete genomecobalt transport protein4e-0652
NC_010321:429720:435653435653436459807Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completecobalt transport protein4e-0652
NC_013921:1977444:199413719941371994943807Thermoanaerobacter italicus Ab9 chromosome, complete genomecobalt transport protein5e-0651.6
NC_014209:1910109:192680819268081927614807Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,cobalt transport protein6e-0651.6
NC_010718:193231:237152237152237949798Natranaerobius thermophilus JW/NM-WN-LF, complete genomecobalt transport protein6e-0651.6
NC_004461:746284:763053763053763892840Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein7e-0651.2
NC_007168:1923723:192774719277471928556810Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein8e-0651.2