Pre_GI Gene

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Host: NC_010079 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010079:2352691 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23526912353089399ribosomal protein S9QuickGO ontologyBLASTP
23531032353540438ribosomal protein L13QuickGO ontologyBLASTP
23537802354583804pseudouridylate synthaseQuickGO ontologyBLASTP
23545882355394807cobalt Co2 ABC superfamily ATP binding cassette transporter membrane proteinQuickGO ontologyBLASTP
23553842356244861cobalt Co2 ABC superfamily ATP binding cassette transporter ABC proteinQuickGO ontologyBLASTP
23562412357050810ABC superfamily ATP binding cassette transporter ABC proteinQuickGO ontologyBLASTP
23575882357956369ribosomal protein L17QuickGO ontologyBLASTP
23579732358917945DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
23589922359381390ribosomal protein S11QuickGO ontologyBLASTP
23594052359770366ribosomal protein S13QuickGO ontologyBLASTP
23597932359906114ribosomal protein L36QuickGO ontologyBLASTP
23599382360156219protein-synthesizing GTPaseQuickGO ontologyBLASTP
23603492360996648adenylate kinaseQuickGO ontologyBLASTP
236101323623051293Sec family Type I general secretory pathway preprotein translocase SecYQuickGO ontologyBLASTP
23623052362745441ribosomal protein L15QuickGO ontologyBLASTP
23627622362941180ribosomal protein L30QuickGO ontologyBLASTP
23629582363458501ribosomal protein S5QuickGO ontologyBLASTP
23634792363838360ribosomal protein L18QuickGO ontologyBLASTP
23638692364405537ribosomal protein L6QuickGO ontologyBLASTP
23644302364828399ribosomal protein S8QuickGO ontologyBLASTP
23648602365045186ribosomal protein S14QuickGO ontologyBLASTP
23650682365607540ribosomal protein L5QuickGO ontologyBLASTP
23656342365951318ribosomal protein L24QuickGO ontologyBLASTP
23659872366355369ribosomal protein L14QuickGO ontologyBLASTP
23663872366650264ribosomal protein S17QuickGO ontologyBLASTP
23666742366883210ribosomal protein L29QuickGO ontologyBLASTP