Pre_GI: BLASTP Hits

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Query: NC_011094:638552:642072 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 642072, End: 642419, Length: 348

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4962008:498699849869984987327330Escherichia coli S88 chromosome, complete genomeMinor tail protein M5e-1373.2
NC_008563:5011997:503698850369885037317330Escherichia coli APEC O1, complete genomeputative minor tail protein5e-1373.2
NC_013008:918215:921280921280921609330Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of prophage CP-933K5e-1373.2
NC_011740:4520373:454446745444674544796330Escherichia fergusonii ATCC 35469, complete genomeMinor tail protein M5e-1373.2
NC_008563:2041345:206010220601022060443342Escherichia coli APEC O1, complete genomeputative minor tail protein2e-1271.6
NC_013856:595496:611761611761612150390Azospirillum sp. B510 plasmid pAB510b, complete sequenceminor tail protein M3e-1063.9
NC_013361:3597812:362243536224353622776342Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein4e-1063.5
NC_013008:1513000:151657315165731516914342Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeminor tail protein9e-1062.4
NC_011353:1513000:151628515162851516626342Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein9e-1062.4
NC_002695:1571389:157535715753571575698342Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein9e-1062.4
NC_011750:919953:925922925922926263342Escherichia coli IAI39 chromosome, complete genomeminor tail protein M8e-0959.3
NC_013361:1593543:160098416009841601325342Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein8e-0959.3
NC_013364:1997891:202018620201862020527342Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein8e-0959.3
AP010958:2272919:229542222954222295751330Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative minor tail protein2e-0858.2
NC_013353:2272919:229542222954222295751330Escherichia coli O103:H2 str. 12009, complete genomeminor tail protein2e-0858.2
NC_013361:1896446:190675619067561907085330Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein2e-0858.2
NC_013941:2425233:244900424490042449333330Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail component of prophage CP-933R2e-0858.2
NC_013941:1963523:197470019747001975029330Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeminor tail family protein1e-0858.2
NC_013941:5317424:534266253426625342991330Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeminor tail protein2e-0857.4
NC_011751:1377457:138627413862741386603330Escherichia coli UMN026 chromosome, complete genomeMinor tail protein M3e-0857
NC_011750:527470:551110551110551439330Escherichia coli IAI39 chromosome, complete genomeminor tail protein M3e-0857
NC_007434:1712000:172612917261291726473345Burkholderia pseudomallei 1710b chromosome I, complete sequencePhage minor tail protein6e-0856.2
NC_011601:756885:759443759443759772330Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeminor tail protein7e-0855.8
NC_013364:863209:873655873655873984330Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein9e-0855.5
AP010958:1472506:148047214804721480801330Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative minor tail protein9e-0855.5
NC_002695:2158314:216880221688022169131330Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein9e-0855.5
NC_002655:1909139:191924919192491919578330Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933O9e-0855.5
NC_004431:1352906:136178613617861362115330Escherichia coli CFT073, complete genomePutative tail fiber component M of prophage9e-0855.5
NC_011750:1931384:194284419428441943173330Escherichia coli IAI39 chromosome, complete genomeminor tail protein M9e-0855.5
NC_002695:2893951:290482329048232905152330Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein9e-0855.5
NC_011353:1761977:177160217716021771931330Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein9e-0855.5
NC_011353:2892265:290032229003222900651330Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein9e-0855.5
NC_011745:1055354:106580510658051066134330Escherichia coli ED1a chromosome, complete genomeminor tail protein M9e-0855.5
NC_013364:3312379:332549133254913325820330Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein9e-0855.5
NC_013364:2522888:254557425455742545903330Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein9e-0855.5
NC_013361:2169948:218051121805112180840330Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein9e-0855.5
NC_013353:1472506:148047214804721480801330Escherichia coli O103:H2 str. 12009, complete genomeminor tail protein9e-0855.5
NC_013008:2889743:290061629006162900945330Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber component M of prophage CP-933U9e-0855.5
NC_013008:1761165:177057817705781770907330Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage minor tail protein9e-0855.5
NC_002655:2730659:275411227541122754441330Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber component M of prophage CP-933U1e-0755.1
NC_011745:2025725:203647420364742036803330Escherichia coli ED1a chromosome, complete genomeminor tail protein M3e-0753.9
NC_011353:1195179:120501912050191205348330Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein4e-0753.5
NC_011742:585908:594790594790595119330Escherichia coli S88 chromosome, complete genomeMinor tail protein M1e-0652
NC_020418:2868000:289343928934392893774336Morganella morganii subsp. morganii KT, complete genomePhage minor tail protein1e-0652
NC_009436:2395913:241603024160302416368339Enterobacter sp. 638, complete genomephage minor tail family protein1e-0548.9