Pre_GI: BLASTP Hits

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Query: NC_011092:76993:95512 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 95512, End: 96405, Length: 894

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:1811000:184401618440161844906891Klebsiella pneumoniae 342 chromosome, complete genomeP-type conjugative transfer protein VirB98e-92337
NC_014500:3097362:315363931536393154532894Dickeya dadantii 3937 chromosome, complete genomeVirB92e-91335
NC_012912:1701231:170123117012311702121891Dickeya zeae Ech1591, complete genomeP-type conjugative transfer protein VirB93e-91335
NC_016818:1795576:182604118260411826925885Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeP-type conjugative transfer protein VirB92e-86318
NC_016845:3448881:347504834750483475956909Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,type IV secretory pathway VirB9 component1e-71269
NC_012731:3411161:345592534559253456833909Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB9 component7e-70264
NC_009792:859228:877147877147878055909Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-67255
NC_020181:473170:491090491090491995906Enterobacter aerogenes EA1509E, complete genomeForms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9)3e-67255
NC_013592:2968500:300420730042073005112906Dickeya dadantii Ech586, complete genomeP-type conjugative transfer protein VirB91e-66253
NC_016513:54802:607116071161601891Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeCmgb91e-39163
NC_010170:3908500:392261839226183923505888Bordetella petrii, complete genometype IV secretion system protein VirB99e-25114
NC_014914:127873:148697148697149509813Taylorella equigenitalis MCE9 chromosome, complete genomeConjugal transfer-like protein5e-1685.5
NC_009254:365812:371054371054371878825Burkholderia vietnamiensis G4 chromosome 3, complete sequenceconjugal transfer protein TrbG/VirB9/CagX8e-1581.3
NC_009879:835227:853981853981854733753Rickettsia canadensis str. McKiel, complete genomehypothetical protein1e-1480.9
NC_016929:825413:844094844094844846753Rickettsia canadensis str. CA410 chromosome, complete genomehypothetical protein2e-1480.1
NC_004842:62000:777757777578587813Anaplasma marginale str. St. Maries, complete genomeconjugal transfer protein trbG precursor3e-1479.3
NC_012026:75812:771727717277984813Anaplasma marginale str. Florida, complete genomeconjugal transfer protein trbG precursor (trbG)9e-1477.8
NC_011001:372185:386255386255387079825Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB91e-1377.4
NC_010515:1124298:113167011316701132494825Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceConjugal transfer protein TrbG/VirB9/CagX2e-1376.6
NC_009488:327285:332462332462333223762Orientia tsutsugamushi str. Boryong, complete genomeconjugal transfer protein2e-1376.6
NC_008061:2106848:211422021142202115044825Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceConjugal transfer protein TrbG/VirB9/CagX4e-1375.5
NC_007799:186000:206250206250207062813Ehrlichia chaffeensis str. Arkansas, complete genometype IV secretion system protein, VirB95e-1168.6
NC_014923:5765660:577563157756315776512882Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeP-type conjugative transfer protein VirB91e-0964.3
NC_015675:6276357:633030263303026331183882Mesorhizobium opportunistum WSM2075 chromosome, complete genomeP-type conjugative transfer protein VirB91e-0964.3
NC_019973:5694620:570459157045915705472882Mesorhizobium australicum WSM2073, complete genometype IV secretory pathway, VirB9 component1e-0964.3
NC_016814:18000:369563695637765810Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceType IV secretion system protein virB9 Flags: Precursor1e-0860.8
NC_007354:1087456:110492211049221105734813Ehrlichia canis str. Jake, complete genomeConjugal transfer protein TrbG/VirB9/CagX5e-0858.5
NC_013722:2150882:216367121636712164432762Xanthomonas albilineans, complete genomeputative type iv secretion system protein virb96e-0858.2
NC_002978:4973:497349735767795Wolbachia endosymbiont of Drosophila melanogaster, complete genometype IV secretion system protein VirB97e-0858.2
NC_004842:1132441:115982511598251160664840Anaplasma marginale str. St. Maries, complete genomeVirB9 protein4e-0755.5
NC_012026:1135041:116393511639351164774840Anaplasma marginale str. Florida, complete genomeVirB9 protein (virB9)4e-0755.5
NC_017376:538000:5512215512215527861566Helicobacter pylori SNT49 chromosome, complete genomecag pathogenicity island protein X8e-0754.7
NC_018939:547793:5600145600145615821569Helicobacter pylori 26695 chromosome, complete genomecag pathogenicity island protein (cag8)8e-0754.7
NC_000915:547783:5600045600045615721569Helicobacter pylori 26695, complete genomecag pathogenicity island protein (cag8)8e-0754.7
NC_017362:506950:5190465190465206141569Helicobacter pylori Lithuania75 chromosome, complete genomecag pathogenicity island protein X VirB9-like protein8e-0754.7
NC_014560:518582:5237215237215252861566Helicobacter pylori SJM180 chromosome, complete genomecag pathogenicity island protein X9e-0754.7
NC_017365:848500:8536808536808552451566Helicobacter pylori F30, complete genomecag pathogenicity island protein1e-0654.3
NC_000921:511642:5235485235485251161569Helicobacter pylori J99, complete genomecag island protein1e-0654.3
NC_017359:813500:8186818186818202491569Helicobacter pylori Sat464 chromosome, complete genomecag pathogenicity island protein (cagX, cag8)1e-0654.3
NC_017371:530673:5429335429335444981566Helicobacter pylori Gambia94/24 chromosome, complete genomecag pathogenicity island protein X1e-0654.3
NC_017367:562918:5745865745865761541569Helicobacter pylori F57, complete genomecag pathogenicity island protein1e-0654.3
NC_014555:502151:5137925137925153571566Helicobacter pylori PeCan4 chromosome, complete genomecag pathogenicity island protein X1e-0654.3
NC_017355:493237:5052035052035067711569Helicobacter pylori v225d chromosome, complete genomeCag81e-0654.3
NC_017358:563336:5745045745045760721569Helicobacter pylori Cuz20 chromosome, complete genomecag pathogenicity island protein (cagX, cag8)1e-0654.3
NC_017368:852490:8574888574888590531566Helicobacter pylori F16, complete genomecag pathogenicity island protein1e-0654.3
NC_017375:872478:8774818774818790461566Helicobacter pylori 83 chromosome, complete genomecag pathogenicity island protein9e-0754.3
NC_010698:819912:8310828310828326501569Helicobacter pylori Shi470, complete genomecag pathogenicity island protein (cag8)1e-0654.3
NC_007086:1936505:195965019596501960417768Xanthomonas campestris pv. campestris str. 8004, complete genomeVirB9 protein1e-0654.3
NC_003902:2933121:294980229498022950569768Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB9 protein1e-0654.3
NC_017366:535188:5474685474685490331566Helicobacter pylori F32, complete genomecag pathogenicity island protein1e-0654.3
NC_017063:800156:8126018126018141661566Helicobacter pylori ELS37 chromosome, complete genomecag pathogenicity island protein X1e-0654.3
NC_017374:498588:5080915080915095391449Helicobacter pylori 2017 chromosome, complete genomecag island protein1e-0653.9
NC_017381:500699:5101915101915116391449Helicobacter pylori 2018 chromosome, complete genomecag island protein1e-0653.9
NC_017357:495213:5089165089165103641449Helicobacter pylori 908 chromosome, complete genomecag island protein1e-0653.9
NC_017378:502806:5145665145665161341569Helicobacter pylori Puno120 chromosome, complete genomecag pathogenicity island protein (cagX, cag8)1e-0653.9
NC_017379:505350:5173845173845189491566Helicobacter pylori Puno135 chromosome, complete genomecag pathogenicity island protein1e-0653.9
NC_017360:1052473:1057779105777910593471569Helicobacter pylori 35A chromosome, complete genomecag pathogenicity island protein1e-0653.9
NC_007508:3183631:319346731934673194234768Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype IV secretion system protein VirB92e-0653.1