Pre_GI: BLASTP Hits

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Query: NC_009901:1516340:1520438 Shewanella pealeana ATCC 700345, complete genome

Start: 1520438, End: 1521247, Length: 810

Host Lineage: Shewanella pealeana; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This species was isolated from a microbial community colonizing the accessory nidamental gland of the squid Loligo peali (Atlantic squid) for their capacity to respire on sulfur. It was placed in the Shewanella genus based on physiological and biochemical characteristics and 16S rRNA sequence analysis. Shewanella are ubiquitous in marine environment and play very important role in global carbon and nitrogen cycle. The present strain is moderately halophilic, requiring sodium ions for growth. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010334:1561691:156569015656901566499810Shewanella halifaxensis HAW-EB4, complete genometranscriptional regulator, AraC family6e-122436
NC_010102:2020762:203451220345122035300789Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1996.7
NC_011205:1147556:115121611512161152004789Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator2e-1996.7
NC_006511:1808815:182479918247991825578780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbacterial regulatory protein, AraC family2e-1996.7
NC_011147:1802535:181998218199821820761780Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator2e-1996.7
NC_011294:1048223:105059810505981051377780Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator2e-1996.7
NC_011149:1035990:104229310422931043081789Salmonella enterica subsp. enterica serovar Agona str. SL483,bacterial regulatory protein2e-1996.3
NC_011083:1173802:117746211774621178250789Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacterial regulatory protein2e-1996.3
NC_011094:1127983:113164311316431132431789Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein2e-1996.3
NC_012125:2687980:270174127017412702529789Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator2e-1996.3
NC_011274:1057887:105988710598871060666780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator2e-1996.3
NC_003197:1170746:117274611727461173525780Salmonella typhimurium LT2, complete genomebacterial regulatory protein2e-1996.3
NC_016810:1126693:112906811290681129847780Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-1996.3
NC_016856:1128715:113109011310901131869780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sregulatory protein2e-1996.3
NC_016860:1168431:117043111704311171210780Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator2e-1996.3
NC_016863:1128381:113038111303811131160780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1regulatory protein2e-1996.3
NC_016857:1126693:112900511290051129847843Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74regulatory protein3e-1995.9
NC_017046:1127325:112926211292621130104843Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator3e-1995.9
NC_016831:1950650:196440919644091965197789Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator3e-1995.5
NC_016514:1627664:162959516295951630386792Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcM7e-1890.9
NC_005139:2201820:225498422549842255754771Vibrio vulnificus YJ016 chromosome I, complete sequenceAraC-type DNA-binding domain-containing protein3e-1582.4
NC_003198:1078113:1081781108178110832711491Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (pseudogene)4e-1582
NC_016832:1880174:189439218943921894934543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bacterial regulatory protein, AraC2e-1376.3
NC_012559:2353236:237476723747672375555789Laribacter hongkongensis HLHK9, complete genomeAraC-type DNA-binding domain-containing protein3e-1375.5
NC_013508:2356865:238499423849942385794801Edwardsiella tarda EIB202, complete genometranscriptional regulator, AraC family6e-1374.7
NC_012779:2424967:244536924453692446169801Edwardsiella ictaluri 93-146, complete genometranscriptional regulator, AraC family protein2e-1273.6
NC_002505:514732:544362544362545177816Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, AraC/XylS family2e-1273.2
NC_012668:62500:751637516375978816Vibrio cholerae MJ-1236 chromosome 1, complete sequenceAraC family transcriptional regulator8e-1270.9
NC_016445:2938887:295541629554162956213798Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator AraC/XylS family9e-1270.9
AC_000091:558920:570677570677571474798Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-1170.1
NC_010473:498252:510009510009510806798Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted DNA-binding transcriptional regulator2e-1170.1
NC_000913:558920:570677570677571474798Escherichia coli K12, complete genomeDLP12 prophage; predicted DNA-binding transcriptional regulator2e-1170.1
NC_011353:2957962:296693429669342967731798Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAraC family transcriptional regulator2e-1170.1
NC_012759:461680:473437473437474234798Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative DNA-binding transcriptional regulator2e-1170.1
NC_012947:3231893:324153832415383242335798Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeAraC family transcriptional regulator2e-1170.1
NC_012967:531000:543344543344544141798Escherichia coli B str. REL606 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1170.1
NC_013008:2910567:292180529218052922602798Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA-binding transcriptional regulator2e-1170.1
NC_013941:699286:710800710800711597798Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDLP12 prophage; DNA-binding transcriptional regulator9e-1167.4
NC_007645:6407370:642240164224016423237837Hahella chejuensis KCTC 2396, complete genomeAraC-type DNA-binding domain-containing protein2e-1066.6
NC_008800:2695977:272271627227162723585870Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,AraC family transcriptional regulator2e-1066.6
NC_015224:2017781:203018320301832030944762Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,AraC family transcriptional regulator3e-0962.4
NC_007912:1924392:193926219392621940074813Saccharophagus degradans 2-40, complete genomeRhs element Vgr protein6e-0961.6
NC_015566:3417951:345056934505693451453885Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator6e-0961.6
NC_015761:2373967:239056023905602391471912Salmonella bongori NCTC 12419, complete genomeAraC family transcriptional regulator5e-0858.2
NC_015761:2726000:273806627380662738995930Salmonella bongori NCTC 12419, complete genomeAraC family transcriptional regulator6e-0755.1
NC_011274:2881306:289330028933002894229930Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AraC family transcriptional regulator9e-0754.3
NC_011147:2814664:282791828279182828847930Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator9e-0754.3
NC_011094:2913500:292504229250422925971930Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator HilD9e-0754.3
NC_010102:2967464:298081829808182981747930Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-0754.3
NC_011149:2912219:292636429263642927293930Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator HilD9e-0754.3
NC_003197:3005842:301783630178363018765930Salmonella typhimurium LT2, complete genomeinvasion protein regulatory protein9e-0754.3
NC_006511:2819128:283238228323822833311930Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCAraC-family transcriptional regulator9e-0754.3
NC_011083:2980356:299235029923502993279930Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator HilD9e-0754.3
NC_011294:2890500:290249529024952903424930Salmonella enterica subsp. enterica serovar Enteritidis strAraC family transcriptional regulator9e-0754.3
NC_016810:3028421:304041230404123041341930Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator9e-0754.3
NC_016831:2867766:287975928797592880688930Salmonella enterica subsp. enterica serovar Gallinarum/pullorumAraC family transcriptional regulator9e-0754.3
NC_012125:2938519:295174729517472952676930Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator8e-0754.3
NC_006905:2960260:297136329713632972292930Salmonella enterica subsp. enterica serovar Choleraesuis strregulatory helix-turn-helix proteins, araC family8e-0754.3
NC_011080:2982346:299434029943402995269930Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator HilD8e-0754.3
NC_017046:3027161:303915230391523040081930Salmonella enterica subsp. enterica serovar Typhimurium str. 798AraC family transcriptional regulator9e-0754.3
NC_016863:2974333:298632629863262987255930Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasion protein regulatory protein9e-0754.3
NC_016860:3029272:304126630412663042195930Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional regulator HilD9e-0754.3
NC_016857:3028421:304041230404123041341930Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74invasion protein regulatory protein9e-0754.3
NC_016856:3026426:303807330380733039002930Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasion protein regulatory protein9e-0754.3
NC_011205:3050235:306222730622273063156930Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator HilD2e-0653.1
NC_004631:2842453:285570728557072856636930Salmonella enterica subsp. enterica serovar Typhi Ty2, completeAraC-family transcriptional regulator3e-0652.4
NC_003198:2856596:286985028698502870779930Salmonella enterica subsp. enterica serovar Typhi str. CT18,AraC-family transcriptional regulator3e-0652.4
NC_016832:2829767:284300628430062843935930Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transcriptional regulator hilD3e-0652.4
NC_014618:1040381:105014210501421051053912Enterobacter cloacae SCF1 chromosome, complete genomeAraC family transcriptional regulator6e-0651.6
NC_010067:84093:957339573396662930Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0651.2