Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:1127983 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11279831128645663hypothetical proteinBLASTP
11288161129232417hypothetical proteinBLASTP
11292771129594318heat shock protein HspQQuickGO ontologyBLASTP
112965211308631212hypothetical proteinBLASTP
11310781131626549hypothetical proteinBLASTP
11316431132431789regulatory proteinQuickGO ontologyBLASTP
11324801132761282acylphosphataseQuickGO ontologyBLASTP
11327581133087330sulfur transfer protein TusEQuickGO ontologyBLASTP
11331741133833660hypothetical proteinBLASTP
11338991134048150hypothetical proteinBLASTP
1134227113431690tRNA-SerQuickGO ontologyBLASTP
11351221135997876secreted effector proteinQuickGO ontologyBLASTP
11362091136352144hypothetical protein
11365441136885342chaperone protein SigEQuickGO ontologyBLASTP
113690211385871686inositol phosphate phosphatase SopBQuickGO ontologyBLASTP
11389491139089141hypothetical proteinBLASTP
11391211139306186hypothetical proteinBLASTP
113930911408711563peptidase family C69QuickGO ontologyBLASTP
114095111423151365heavy metal sensor kinase subfamily proteinQuickGO ontologyBLASTP
11423081142988681transcriptional regulatory protein YedWQuickGO ontologyBLASTP
11431241143534411hydroxyisourate hydrolaseQuickGO ontologyBLASTP
114386711443795134-hydroxyphenylacetate 3-monooxygenase reductase componentQuickGO ontologyBLASTP
1144397114595915634-hydroxyphenylacetate 3-monooxygenase oxygenase componentQuickGO ontologyBLASTP
11461771146617441homoprotocatechuate degradation operon regulator HpaRQuickGO ontologyBLASTP
114689211481811290bifunctional 4-hydroxyphenylacetate degradation isomerasedecarboxylaseQuickGO ontologyBLASTP
1148178114964414675-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseQuickGO ontologyBLASTP
1149646115049785234-dihydroxyphenylacetate 23-dioxygenaseQuickGO ontologyBLASTP