Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:3231893 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
32337983234373576DNA packaging Nu1QuickGO ontologyBLASTP
32347623234956195hypothetical proteinBLASTP
32353173235610294Bor family proteinQuickGO ontologyBLASTP
32356423236103462lysis proteinQuickGO ontologyBLASTP
32361003236597498LysozymeQuickGO ontologyBLASTP
32365973236812216Lysis S family proteinQuickGO ontologyBLASTP
32380353238310276Insertion element proteinQuickGO ontologyBLASTP
32382293238732504IS1 transposaseQuickGO ontologyBLASTP
32394503239833384antitermination Q family proteinQuickGO ontologyBLASTP
32399193240056138hypothetical proteinBLASTP
32400563240418363endodeoxyribonuclease RUSQuickGO ontologyBLASTP
32404153240705291hypothetical proteinBLASTP
32406983240868171prophage protein NinEQuickGO ontologyBLASTP
32408683241323456hypothetical proteinBLASTP
32413203241421102hypothetical proteinBLASTP
32415383242335798AraC family transcriptional regulatorQuickGO ontologyBLASTP
32423453242896552kinase inhibitorQuickGO ontologyBLASTP
324336132448871527RecombinaseQuickGO ontologyBLASTP
32451423245474333multidrug efflux proteinQuickGO ontologyBLASTP
32455423245769228BLASTP
32458113246179369BLASTP
32462563246471216hypothetical proteinBLASTP
32465703246788219TraRDksA family transcriptional regulatorQuickGO ontologyBLASTP
32468363247114279hypothetical proteinBLASTP
32470863247457372excisionaseQuickGO ontologyBLASTP
324731332484761164integraseQuickGO ontologyBLASTP
32488113249443633transcriptional regulator FimZQuickGO ontologyBLASTP
32494463249961516fimbrial proteinQuickGO ontologyBLASTP
32499723250949978P pilus assembly protein pilin FimA-like proteinQuickGO ontologyBLASTP
325099132536002610fimbrial biogenesis outer membrane usher proteinQuickGO ontologyBLASTP
32536313254323693Pili assembly chaperone N-terminalQuickGO ontologyBLASTP
32545433255085543fimbrial proteinQuickGO ontologyBLASTP
32555563256422867bifunctional 510-methylene-tetrahydrofolate dehydrogenase 510-methylene-tetrahydrofolate cyclohydrolaseQuickGO ontologyBLASTP
32564243256636213hypothetical proteinBLASTP
32567443257265522membrane-bound metal-dependent hydrolaseQuickGO ontologyBLASTP
325730132586861386cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP