Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:1808815 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1807352180881814674-hydroxyphenylacetate catabolismQuickGO ontologyBLASTP
18103781810818441homoprotocatechuate degradative operon repressorQuickGO ontologyBLASTP
1811291181259813084-hydroxyphenylacetate 3-monooxygenaseQuickGO ontologyBLASTP
181261618131285134-hydroxyphenylacetate 3-monooxygenase coupling proteinQuickGO ontologyBLASTP
18134611813871411hypothetical proteinBLASTP
18140071814687681response regulatorQuickGO ontologyBLASTP
181468018160441365histidine kinaseQuickGO ontologyBLASTP
18177951817905111hypothetical proteinBLASTP
18179061818076171hypothetical proteinBLASTP
181840918200941686cell invasion proteinQuickGO ontologyBLASTP
18201111820452342cell invasion proteinQuickGO ontologyBLASTP
18204621820782321putative inner membrane proteinQuickGO ontologyBLASTP
18210001821875876hypothetical proteinBLASTP
18220981822778681hypothetical proteinBLASTP
1822918182300285tRNA-SerQuickGO ontologyBLASTP
18233971824056660hypothetical proteinBLASTP
18241431824472330hypothetical protein in helD-serT intergenic regionQuickGO ontologyBLASTP
18244691824750282putative acylphosphataseQuickGO ontologyBLASTP
18247991825578780bacterial regulatory protein AraC familyQuickGO ontologyBLASTP
182636618275771212hypothetical proteinBLASTP
18276351827952318hypothetical proteinBLASTP
18279971828410414hypothetical proteinBLASTP
18285841829246663hypothetical proteinBLASTP
18293411829799459methylglyoxal synthaseQuickGO ontologyBLASTP
182983518318892055helicase IV 75 kD helicaseQuickGO ontologyBLASTP
18320131832459447hypothetical proteinBLASTP