Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:1147556 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11475561148218663hypothetical proteinBLASTP
11488501149167318heat shock protein HspQQuickGO ontologyBLASTP
114922511504361212hypothetical proteinBLASTP
11506511151199549hypothetical proteinBLASTP
11512161152004789AraC family transcriptional regulatorQuickGO ontologyBLASTP
11520531152334282acylphosphataseQuickGO ontologyBLASTP
11523311152660330sulfur transfer protein TusEQuickGO ontologyBLASTP
11527471153406660hypothetical proteinBLASTP
11535291153681153hypothetical proteinBLASTP
1153800115388990tRNA-SerQuickGO ontologyBLASTP
11540451154725681hypothetical proteinBLASTP
11549471155822876hypothetical proteinBLASTP
11560821156360279inner membrane proteinQuickGO ontologyBLASTP
11563701156711342chaperone protein SigEQuickGO ontologyBLASTP
115672811584131686inositol phosphate phosphatase SopBQuickGO ontologyBLASTP
11587751158915141hypothetical proteinBLASTP
115913511606971563peptidase family C69QuickGO ontologyBLASTP
116077711621411365heavy metal sensor kinase family proteinQuickGO ontologyBLASTP
11621341162814681transcriptional regulatory protein YedWQuickGO ontologyBLASTP
11629501163360411hydroxyisourate hydrolaseQuickGO ontologyBLASTP
116369311642055134-hydroxyphenylacetate 3-monooxygenase reductase componentQuickGO ontologyBLASTP
1164223116578515634-hydroxyphenylacetate 3-monooxygenase oxygenase componentQuickGO ontologyBLASTP
11660031166443441homoprotocatechuate degradation operon regulator HpaRQuickGO ontologyBLASTP
1166719116800812904-hydroxyphenylacetate degradation bifunctionalisomerasedecarboxylaseQuickGO ontologyBLASTP
1168005116947114675-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseQuickGO ontologyBLASTP
1169473117032485234-dihydroxyphenylacetate 23-dioxygenaseQuickGO ontologyBLASTP