Pre_GI Gene

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Host: NC_010102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010102:2020762 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
202076220223241563hypothetical proteinBLASTP
20223422022854513hypothetical proteinBLASTP
20228512023033183hypothetical proteinBLASTP
20230462023153108hypothetical proteinBLASTP
20231762023586411hypothetical proteinBLASTP
20237222024402681hypothetical proteinBLASTP
202439520257591365hypothetical proteinBLASTP
202583920274011563hypothetical proteinBLASTP
20274042027589186hypothetical proteinBLASTP
20276212027791171hypothetical proteinBLASTP
202820720298081602hypothetical proteinBLASTP
20298252030166342hypothetical proteinBLASTP
20301762030454279hypothetical proteinBLASTP
20307142031589876hypothetical proteinBLASTP
20318112032491681hypothetical proteinBLASTP
2032631203271585tRNA-SerQuickGO ontologyBLASTP
20328872032991105hypothetical protein
20331102033769660hypothetical proteinBLASTP
20338562034185330hypothetical proteinBLASTP
20341822034463282hypothetical proteinBLASTP
20345122035300789hypothetical proteinBLASTP
20353172035865549hypothetical proteinBLASTP
20358622035966105hypothetical proteinBLASTP
203608020372911212hypothetical proteinBLASTP
20373492037666318hypothetical proteinBLASTP
20377112038127417hypothetical proteinBLASTP
20382982038960663hypothetical proteinBLASTP
20390552039513459hypothetical proteinBLASTP
203954920416032055hypothetical proteinBLASTP