Pre_GI Gene

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Host: NC_011083 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:1173802 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11738021174464663hypothetical proteinBLASTP
11746351175051417BLASTP
11750961175413318hemimethylated DNA-binding proteinQuickGO ontologyBLASTP
117547111766821212protein YccWQuickGO ontologyBLASTP
11768971177445549hypothetical proteinBLASTP
11774621178250789bacterial regulatory proteinQuickGO ontologyBLASTP
11782991178580282acylphosphataseQuickGO ontologyBLASTP
11785771178906330sulfurtransferase TusEQuickGO ontologyBLASTP
11789931179652660inner membrane protein YccAQuickGO ontologyBLASTP
1180046118013590tRNA-SerQuickGO ontologyBLASTP
11800801180199120hypothetical protein
11802731180776504pathogenicity island-encoded protein AQuickGO ontologyBLASTP
11811751182050876secreted effector proteinQuickGO ontologyBLASTP
11823101182588279putative inner membrane proteinQuickGO ontologyBLASTP
11825981182939342chaperone protein SigEQuickGO ontologyBLASTP
118295611846411686inositol phosphate phosphatase SopBQuickGO ontologyBLASTP
11850041185144141hypothetical proteinBLASTP
11851761185361186hypothetical proteinBLASTP
118536411869261563peptidase family C69QuickGO ontologyBLASTP
118700611883701365heavy metal sensor kinase subfamilyQuickGO ontologyBLASTP
11885131189043531BLASTP
11891791189589411hydroxyisourate hydrolaseQuickGO ontologyBLASTP
118992211904345134-hydroxyphenylacetate 3-monooxygenase reductase componentQuickGO ontologyBLASTP
1190452119201415634-hydroxyphenylacetate 3-monooxygenase oxygenase componentQuickGO ontologyBLASTP
11922321192672441homoprotocatechuate degradation operon regulator HpaRQuickGO ontologyBLASTP
1192947119423612904-hydroxyphenylacetate degradation bifunctionalisomerasedecarboxylaseQuickGO ontologyBLASTP
1194233119569914675-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseQuickGO ontologyBLASTP
1195701119655285234-dihydroxyphenylacetate 23-dioxygenaseQuickGO ontologyBLASTP