Pre_GI: BLASTP Hits

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Query: NC_007925:3933765:3952910 Rhodopseudomonas palustris BisB18, complete genome

Start: 3952910, End: 3953635, Length: 726

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:18497:415374153742445909Bradyrhizobium japonicum USDA 110, complete genomeprobable transglycosylase3e-54211
NC_011386:3723019:257725773497921Oligotropha carboxidovorans OM5, complete genomelytic transglycosylase, catalytic2e-48192
NC_008686:1472899:147489714748971475661765Paracoccus denitrificans PD1222 chromosome 1, complete sequenceLytic transglycosylase, catalytic2e-46186
NC_014834:959986:959986959986960753768Rhodopseudomonas palustris DX-1 chromosome, complete genomelytic transglycosylase9e-46183
NC_017249:3119000:312077331207733121489717Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein9e-46183
NC_009720:4406991:444047844404784441275798Xanthobacter autotrophicus Py2, complete genomelytic transglycosylase catalytic5e-45181
NC_017249:18493:415304153042072543Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-42173
NC_011365:1135750:116084511608451161546702Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomelytic transglycosylase9e-39160
NC_010338:2443765:244503624450362445866831Caulobacter sp. K31, complete genomeLytic transglycosylase catalytic8e-38157
NC_010125:381711:399853399853400524672Gluconacetobacter diazotrophicus PAl 5, complete genomeputative lytic transglycosylase5e-38157
NC_017150:2383361:2397814239781423991451332Acetobacter pasteurianus IFO 3283-01-42C, complete genomemurein transglycosylase2e-37155
NC_017146:2476844:2491297249129724926281332Acetobacter pasteurianus IFO 3283-26, complete genomemurein transglycosylase2e-37155
NC_017125:2476802:2491255249125524925861332Acetobacter pasteurianus IFO 3283-22, complete genomemurein transglycosylase2e-37155
NC_017121:2474588:2488617248861724899481332Acetobacter pasteurianus IFO 3283-07, complete genomemurein transglycosylase2e-37155
NC_017111:2474601:2488630248863024899611332Acetobacter pasteurianus IFO 3283-32, complete genomemurein transglycosylase2e-37155
NC_017108:2474583:2488612248861224899431332Acetobacter pasteurianus IFO 3283-12, complete genomemurein transglycosylase2e-37155
NC_017100:2476822:2491275249127524926061332Acetobacter pasteurianus IFO 3283-03, complete genomemurein transglycosylase2e-37155
NC_013209:2476039:2490068249006824913991332Acetobacter pasteurianus IFO 3283-01, complete genomemurein transglycosylase2e-37155
NC_014100:2782000:279910827991082799737630Caulobacter segnis ATCC 21756 chromosome, complete genomelytic transglycosylase2e-36152
NC_016027:2512297:2515110251511025162521143Gluconacetobacter xylinus NBRC 3288, complete genomemurein transglycosylase8e-36150
NC_009719:1972545:197254519725451973300756Parvibaculum lavamentivorans DS-1 chromosome, complete genomelytic transglycosylase catalytic subunit8e-35147
NC_016027:1647110:1669092166909216702611170Gluconacetobacter xylinus NBRC 3288, complete genomemurein transglycosylase2e-32139
NC_015186:2908387:291296029129602913463504Acidiphilium multivorum AIU301, complete genomehypothetical protein2e-25115
NC_007644:1638083:164380416438041644424621Moorella thermoacetica ATCC 39073, complete genomeLytic transglycosylase, catalytic2e-1686.3
NC_018607:1803500:180877418087741809490717Brachyspira pilosicoli B2904 chromosome, complete genomelytic transglycosylase2e-1685.9
NC_018604:1045774:105879510587951059511717Brachyspira pilosicoli WesB complete genomelytic transglycosylase4e-1685.1
NC_014150:446359:453240453240453983744Brachyspira murdochii DSM 12563 chromosome, complete genomeLytic transglycosylase catalytic5e-1684.7
NC_019908:982471:989710989710990426717Brachyspira pilosicoli P43/6/78 chromosome, complete genomelytic transglycosylase1e-1583.6
NC_017243:1229597:124215712421571242882726Brachyspira intermedia PWS/A chromosome, complete genomelytic transglycosylase1e-1583.2
NC_014330:2268773:228178822817882282501714Brachyspira pilosicoli 95/1000 chromosome, complete genomelytic transglycosylase1e-1583.2
NC_014376:3671441:368650836865083687230723Clostridium saccharolyticum WM1 chromosome, complete genomeLytic transglycosylase catalytic2e-1582.8
NC_009483:5113729:512062851206285121383756Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase4e-1581.6
NC_012225:787737:794109794109794822714Brachyspira hyodysenteriae WA1, complete genomelytic transglycosylase4e-1581.6
NC_007517:2165657:217968121796812180292612Geobacter metallireducens GS-15, complete genomeLytic transglycosylase, catalytic4e-1581.6
NC_007760:4055860:409261540926154093244630Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic1e-1480.5
NC_014311:1888686:189788118978811898510630Ralstonia solanacearum PSI07 chromosome, complete genometransglycosylase2e-1479
NC_011891:4104000:412519141251914125820630Anaeromyxobacter dehalogenans 2CP-1, complete genomeLytic transglycosylase catalytic2e-1375.9
NC_017179:281069:299909299909300577669Clostridium difficile BI1, complete genometransglycosylase3e-1375.5
NC_000964:2146000:2248350224835022552076858Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-1375.5
NC_015850:2048251:211015521101552111087933Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase6e-1374.3
NC_014733:1073540:107696010769601077583624Methylovorus sp. MP688 chromosome, complete genomelytic transglycosylase catalytic7e-1374.3
NC_008593:2020473:203784220378422038495654Clostridium novyi NT, complete genomelytic murein transglycosylase, putative1e-1273.6
NC_014972:544146:547516547516548247732Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic1e-1273.6
NC_014219:1736000:175182117518211752510690Bacillus selenitireducens MLS10 chromosome, complete genomeLytic transglycosylase catalytic1e-1273.6
NC_009664:533021:5479845479845490901107Kineococcus radiotolerans SRS30216, complete genomeLytic transglycosylase catalytic2e-1272.8
NC_013173:1231213:123625212362521236854603Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic3e-1272.4
NC_014972:137184:158025158025158633609Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic3e-1272.4
NC_009675:4281249:429915642991564299785630Anaeromyxobacter sp. Fw109-5 chromosome, complete genomelytic transglycosylase catalytic subunit3e-1272.4
NC_009092:4337617:435105243510524351783732Shewanella loihica PV-4, complete genomeLytic transglycosylase, catalytic5e-1271.6
NC_013792:109203:1174391174391196102172Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequenceSPbeta phage protein; lytic transglycosylase5e-1271.2
NC_010814:2217153:224462722446272245265639Geobacter lovleyi SZ, complete genomeLytic transglycosylase catalytic5e-1271.2
NC_015425:2277570:229041522904152291074660Clostridium botulinum BKT015925 chromosome, complete genomelytic murein transglycosylase9e-1270.5
NC_016627:793583:793583793583794260678Clostridium clariflavum DSM 19732 chromosome, complete genomelytic murein transglycosylase1e-1170.5
NC_007759:1571425:157745515774551578108654Syntrophus aciditrophicus SB, complete genomesoluble lytic murein transglycosylase3e-1168.6
NC_015850:1155376:117330311733031173821519Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase4e-1168.6
NC_009483:2854500:287564628756462876242597Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase7e-1167.8
NC_010511:6067000:6100598610059861016201023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase9e-1167.4
NC_010511:2079744:2132561213256121335831023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase1e-1067
NC_017030:8766757:877403587740358774856822Corallococcus coralloides DSM 2259 chromosome, complete genometransglycosylase1e-1067
NC_009012:3224000:323867632386763239362687Clostridium thermocellum ATCC 27405, complete genomeLytic transglycosylase, catalytic2e-1066.6
NC_014220:1858747:187483218748321875473642Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeLytic transglycosylase catalytic2e-1066.2
NC_015572:1421782:143602314360231436871849Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit2e-1066.2
NC_015437:697051:7302427302427320621821Selenomonas sputigena ATCC 35185 chromosome, complete genomeLytic transglycosylase catalytic2e-1065.9
NC_013173:1356526:137746913774691377996528Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic2e-1065.9
NC_004757:2412161:241216124121612413066906Nitrosomonas europaea ATCC 19718, complete genomeSLT domain8e-1064.3
NC_015850:110364:123790123790124380591Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase8e-1064.3
NC_013194:963735:997671997671998336666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLytic transglycosylase catalytic7e-1064.3
NC_020126:8984500:898707289870728987959888Myxococcus stipitatus DSM 14675, complete genometransglycosylase SLT domain-containing protein2e-0963.2
NC_012914:1824955:182495518249551825521567Paenibacillus sp. JDR-2, complete genomeLytic transglycosylase catalytic2e-0963.2
NC_011894:2184956:220462022046202205339720Methylobacterium nodulans ORS 2060, complete genomeLytic transglycosylase catalytic2e-0963.2
NC_015850:1279372:127971012797101280270561Acidithiobacillus caldus SM-1 chromosome, complete genometransglycosylase2e-0962.8
NC_013205:644914:6555986555986570401443Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Lytic transglycosylase catalytic3e-0962
NC_011772:1575674:159336415933641594149786Bacillus cereus G9842, complete genometransglycosylase, SLT family4e-0961.6
NC_013523:959625:9807889807889830282241Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeLytic transglycosylase catalytic5e-0961.2
NC_017179:1197763:119776311977631198317555Clostridium difficile BI1, complete genometransglycosylase8e-0960.8
NC_013315:1187986:118798611879861188540555Clostridium difficile CD196 chromosome, complete genometransglycosylase8e-0960.8
NC_009089:1329826:132982613298261330380555Clostridium difficile 630, complete genomeputative transglycosylase8e-0960.8
NC_012962:3864000:3864463386446338655361074Photorhabdus asymbiotica, complete genomeMembrane-bound lytic murein transglycosylase C precursor1e-0860.5
NC_010410:3719599:372545937254593726067609Acinetobacter baumannii AYE, complete genomehypothetical protein1e-0860.5
NC_007760:3735749:374974437497443750202459Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic1e-0860.1
NC_011283:4170369:4194180419418041961051926Klebsiella pneumoniae 342 chromosome, complete genometransglycosylase SLT domain-containing protein2e-0859.7
NC_016845:1285435:1323839132383913257641926Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transglycosylase2e-0859.7
NC_010611:208268:223916223916224404489Acinetobacter baumannii ACICU, complete genomesoluble lytic murein transglycosylase, related regulatory protein2e-0859.3
NC_021182:2059143:208183620818362082390555Clostridium pasteurianum BC1, complete genomesoluble lytic murein transglycosylase-like protein3e-0858.9
NC_014121:3627588:3644135364413536459041770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-0858.9
NC_015318:1455444:147780914778091478426618Hippea maritima DSM 10411 chromosome, complete genomelytic transglycosylase catalytic subunit4e-0858.5
NC_009633:2137999:2137999213799921397591761Alkaliphilus metalliredigens QYMF chromosome, complete genomelytic transglycosylase catalytic subunit4e-0858.5
NC_017160:945176:9465759465759476511077Yersinia pestis D182038 chromosome, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_017154:941065:9446029446029456781077Yersinia pestis D106004 chromosome, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_014029:1001000:1002457100245710035331077Yersinia pestis Z176003 chromosome, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_009708:986918:9883189883189893941077Yersinia pseudotuberculosis IP 31758 chromosome, complete genomemurein transglycosylase C6e-0857.8
NC_005810:3964468:3965868396586839669441077Yersinia pestis biovar Microtus str. 91001, complete genomemurein transglycosylase C6e-0857.8
NC_010159:138879:1589991589991600751077Yersinia pestis Angola, complete genomemembrane-bound lytic murein transglycosylase C (Murein hydrolase C)6e-0857.8
NC_010634:3692321:3711327371132737124031077Yersinia pseudotuberculosis PB1/+, complete genomelytic transglycosylase catalytic6e-0857.8
NC_014733:1857020:188059718805971881241645Methylovorus sp. MP688 chromosome, complete genomelytic transglycosylase catalytic6e-0857.8
NC_017168:50391:5187551875529511077Yersinia pestis A1122 chromosome, complete genomemurein transglycosylase C6e-0857.8
NC_003143:1033500:1052311105231110533991089Yersinia pestis CO92, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_004088:3661601:3680389368038936814771089Yersinia pestis KIM, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_016818:3851542:3856033385603338571121080Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completelytic murein transglycosylase6e-0857.8
NC_015061:3840463:3844310384431038453891080Rahnella sp. Y9602 chromosome, complete genomelytic transglycosylase catalytic6e-0857.8
NC_017265:854492:8558928558928569801089Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,membrane-bound lytic murein transglycosylase C6e-0857.8
NC_009381:627685:6290846290846301721089Yersinia pestis Pestoides F chromosome, complete genomemurein transglycosylase C6e-0857.8
NC_010465:933488:9349069349069359941089Yersinia pseudotuberculosis YPIII, complete genomeLytic transglycosylase catalytic6e-0857.8
NC_008149:3529428:3548215354821535493031089Yersinia pestis Nepal516, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_008150:361224:3647433647433658311089Yersinia pestis Antiqua, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_006155:3779381:3798209379820937992971089Yersinia pseudotuberculosis IP 32953, complete genomemembrane-bound lytic murein transglycosylase C6e-0857.8
NC_010172:57500:9066790667917581092Methylobacterium extorquens PA1, complete genomeLytic transglycosylase catalytic8e-0857.4
NC_020418:1397112:1418300141830014194151116Morganella morganii subsp. morganii KT, complete genomeMembrane-bound lytic murein transglycosylase C precursor9e-0857.4
NC_011660:1889504:189604518960451896713669Listeria monocytogenes HCC23 chromosome, complete genometransglycosylase1e-0757
NC_013508:275081:2932152932152942941080Edwardsiella tarda EIB202, complete genomemurein transglycosylase C1e-0757
NC_020211:4484817:4486250448625044873261077Serratia marcescens WW4, complete genomemembrane-bound lytic murein transglycosylase C1e-0756.6
NC_013093:2599591:259959125995912600574984Actinosynnema mirum DSM 43827, complete genomeLytic transglycosylase catalytic1e-0756.6
NC_007951:4608560:4634624463462446365911968Burkholderia xenovorans LB400 chromosome 1, complete sequenceTransglycosylase2e-0756.2
NC_013891:640784:657261657261657935675Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometransglycosylase, SLT family2e-0756.2
NC_013524:1207845:122879012287901229689900Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeLytic transglycosylase catalytic2e-0756.2
NC_012779:261438:2762412762412773201080Edwardsiella ictaluri 93-146, complete genomemembrane-bound lytic murein transglycosylase C3e-0755.8
NC_008555:696217:712724712724713407684Listeria welshimeri serovar 6b str. SLCC5334, complete genometransglycosylase, SLT family3e-0755.8
NC_014623:6150028:618544061854406186174735Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransglycosylase slt domain-containing protein3e-0755.5
NC_016845:2306744:2309391230939123113942004Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lytic transglycosylase, catalytic4e-0755.5
NC_017047:3907854:3911701391170139127801080Rahnella aquatilis HX2 chromosome, complete genomemurein transglycosylase C4e-0755.5
NC_015520:2567329:2574407257440725761131707Mahella australiensis 50-1 BON chromosome, complete genomepeptidase M234e-0755.1
NC_010278:1918000:1937451193745119385481098Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,murein transglycosylase C5e-0754.7
NC_010939:1986263:2000747200074720018441098Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeMembrane-bound lytic murein transglycosylase C precursor5e-0754.7
NC_009053:1942973:1975864197586419769611098Actinobacillus pleuropneumoniae L20, complete genomeMembrane-bound lytic murein transglycosylase C precursor5e-0754.7
NC_010718:1959517:198001019800101980597588Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLytic transglycosylase catalytic7e-0754.3
NC_008253:3122148:3122148312214831232301083Escherichia coli 536, complete genomemembrane-bound lytic murein transglycosylase C precursor7e-0754.3
NC_011149:3187022:3187022318702231881071086Salmonella enterica subsp. enterica serovar Agona str. SL483,membrane-bound lytic murein transglycosylase C8e-0753.9
NC_020064:4125500:413714441371444138055912Serratia marcescens FGI94, complete genomesoluble lytic murein transglycosylase-like protein1e-0653.9
NC_014500:1066911:1096350109635010974321083Dickeya dadantii 3937 chromosome, complete genomemembrane-bound lytic murein transglycosylase C1e-0653.9
NC_014550:3377834:3386168338616833872981131Arthrobacter arilaitensis Re117, complete genomeputative M23 family peptidase1e-0653.5
NC_013592:956829:9840999840999851811083Dickeya dadantii Ech586, complete genomeLytic transglycosylase catalytic1e-0653.5
NC_009792:4017510:4017510401751040185951086Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0653.5
NC_011147:3075186:3075186307518630762711086Salmonella enterica subsp. enterica serovar Paratyphi A strmurein transglycosylase C2e-0653.1
NC_006511:3079512:3079512307951230805971086Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCmembrane-bound lytic murein transglycosylase C2e-0653.1
NC_016832:3100683:3100683310068331017681086Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Membrane-bound lytic murein transglycosylase C2e-0652.8
NC_003198:3126548:3126548312654831276331086Salmonella enterica subsp. enterica serovar Typhi str. CT18,membrane-bound lytic murein transglycosylase C2e-0652.8
NC_004631:3112043:3112043311204331131281086Salmonella enterica subsp. enterica serovar Typhi Ty2, completemembrane-bound lytic murein transglycosylase C2e-0652.8
NC_020126:4430142:445184144518414452590750Myxococcus stipitatus DSM 14675, complete genometransglycosylase SLT domain-containing protein2e-0652.8
NC_005955:1029435:105483510548351055344510Bartonella quintana str. Toulouse, complete genomeTransmembrane protein3e-0652.4
NC_012779:610509:6105096105096124371929Edwardsiella ictaluri 93-146, complete genomesoluble lytic murein transglycosylase3e-0652.4
NC_014643:1123601:115253711525371153277741Rothia dentocariosa ATCC 17931 chromosome, complete genomeSLT family transglycosylase3e-0652.4
NC_010611:3413333:3433379343337934353221944Acinetobacter baumannii ACICU, complete genomesoluble lytic murein transglycosylase, related regulatory protein3e-0652.4
NC_002937:1578213:1603093160309316042291137Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetransglycosylase, SLT family4e-0652
NC_015711:5479879:550380255038025504542741Myxococcus fulvus HW-1 chromosome, complete genometransglycosylase SLT domain-containing protein5e-0651.6
NC_014618:4010689:4010689401068940126261938Enterobacter cloacae SCF1 chromosome, complete genomelytic transglycosylase5e-0651.6
NC_020211:2123819:2123819212381921258252007Serratia marcescens WW4, complete genomelytic transglycosylase catalytic subunit6e-0651.2
NC_015580:3252534:3252534325253432545011968Novosphingobium sp. PP1Y, complete genomelytic transglycosylase catalytic subunit subunit6e-0651.2