Pre_GI Gene

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Host: NC_013093 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:2599591 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25995912600574984Lytic transglycosylase catalyticQuickGO ontologyBLASTP
26005712600999429TolA family proteinQuickGO ontology
260099626023151320ATPase FliIYscN familyQuickGO ontologyBLASTP
26023122602992681flagellar assembly protein FliHQuickGO ontologyBLASTP
260297326039891017flagellar motor switch protein FliGQuickGO ontologyBLASTP
260399126056701680flagellar M-ring protein FliFQuickGO ontologyBLASTP
26056672605984318flagellar hook-basal body complex protein FliEQuickGO ontologyBLASTP
26059812606379399protein of unknown function DUF1078 domain proteinQuickGO ontologyBLASTP
26063812606737357flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
26072842607619336hypothetical protein
26076162608014399flagellar protein FliSQuickGO ontologyBLASTP
260802226093141293flagellar hook-associated 2 domain proteinQuickGO ontologyBLASTP
260945726106171161flagellin domain proteinQuickGO ontologyBLASTP
26111852612069885RNA polymerase sigma 28 subunit FliAWhiG subfamilyQuickGO ontologyBLASTP
26123052612787483FlgN family proteinQuickGO ontologyBLASTP
261279026141691380flagellar hook-associated protein FlgKQuickGO ontologyBLASTP
26141762615054879flagellar hook-associated protein 3QuickGO ontologyBLASTP
26150512615563513protein of unknown function DUF180QuickGO ontologyBLASTP
26155172615777261carbon storage regulator CsrAQuickGO ontologyBLASTP
261616726178581692peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
261793126195711641PASPAC sensor hybrid histidine kinaseQuickGO ontologyBLASTP
26195682619948381response regulator receiver proteinQuickGO ontologyBLASTP