Pre_GI Gene

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Host: NC_017249 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:3119000 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31192913119500210hypothetical proteinBLASTP
31196373120002366hypothetical proteinBLASTP
31200813120593513hypothetical proteinBLASTP
31207733121489717hypothetical proteinBLASTP
31216893122525837hypothetical proteinBLASTP
31225223122725204hypothetical protein
31237533123947195hypothetical proteinBLASTP
31240683124460393hypothetical proteinBLASTP
31245183125219702transposaseQuickGO ontologyBLASTP
31256943125909216hypothetical protein
31276083127808201hypothetical protein
31278163128034219hypothetical protein
31285553129187633hypothetical proteinBLASTP
31303863130571186hypothetical protein
31309043131314411hypothetical protein
31315563131786231hypothetical proteinBLASTP
31318743132110237hypothetical protein
31320993132479381hypothetical protein
31325573132856300hypothetical protein
31331273133546420hypothetical proteinBLASTP
313355031347401191hypothetical proteinBLASTP
31348903135402513hypothetical protein
31361703136505336two-component response regulatorQuickGO ontologyBLASTP
31375743137945372hypothetical protein
31382223138413192hypothetical protein
31388793139256378hypothetical protein
31397463140369624hypothetical proteinBLASTP
31404253140781357hypothetical proteinBLASTP