Pre_GI: BLASTP Hits

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Query: NC_006155:2208686:2212145 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2212145, End: 2212798, Length: 654

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:2124185:212841221284122129065654Yersinia pseudotuberculosis PB1/+, complete genomeexonuclease RNase T and DNA polymerase III3e-121434
NC_011667:1:469146915296606Thauera sp. MZ1T plasmid pTha01, complete sequenceExonuclease RNase T and DNA polymerase III9e-51199
NC_016845:4046142:405387740538774054458582Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative exonuclease CP811e-47189
NC_011147:2676972:268684526868452687429585Salmonella enterica subsp. enterica serovar Paratyphi A strexonuclease4e-47187
NC_006511:2677964:269130926913092691893585Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative exonuclease4e-47187
NC_003198:4453457:450308645030864503670585Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative exonuclease4e-47187
NC_020260:312805:321527321527322111585Cronobacter sakazakii Sp291, complete genomeputative exonuclease CP813e-46184
NC_017506:2089769:210113921011392101711573Marinobacter adhaerens HP15 chromosome, complete genomeexonuclease RNase T and DNA polymerase III4e-43174
NC_013508:3188978:322647132264713227070600Edwardsiella tarda EIB202, complete genomeOrf81 bacteriophage 1862e-38159
NC_007645:6858465:687346568734656874034570Hahella chejuensis KCTC 2396, complete genomeputative exonuclease1e-37156
NC_009837:92000:109015109015109878864Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceYacC6e-30130
NC_019757:5852000:586552858655285866355828Cylindrospermum stagnale PCC 7417, complete genomeDNA polymerase III epsilon subunit-like 3'-5' exonuclease1e-23110
NC_004431:1166568:116782311678231168386564Escherichia coli CFT073, complete genomehypothetical protein3e-1995.1
NS_000191:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17, completeDNA polymerase III epsilon subunit2e-1169.7
NC_020419:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeDNA polymerase III epsilon subunit2e-1169.7
NC_012438:1514376:152834415283441528961618Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA polymerase III PolC-type (PolIII)4e-1168.2
NC_014727:2036340:205057920505792051475897Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii polc-type9e-1167
NC_005295:845000:848673848673849401729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon subunit3e-1065.1
NC_006831:821000:824448824448825176729Ehrlichia ruminantium str. Gardel, complete genomeDNA polymerase III, epsilon chain3e-1065.1
NC_017167:1648913:178021217802121781027816Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit epsilon5e-1064.7
NC_014152:1430156:1433347143334714376754329Thermincola sp. JR, complete genomeDNA polymerase III, alpha subunit5e-1064.7
NC_015554:4724245:4724245472424547263772133Alteromonas sp. SN2 chromosome, complete genomeDNA polymerase III, epsilon subunit6e-1064.3
NC_021182:4829000:4832933483293348372764344Clostridium pasteurianum BC1, complete genomeDNA polymerase III, alpha chain7e-1063.9
NC_006832:825000:828548828548829276729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon chain1e-0963.5
NC_013205:1123280:115256811525681153290723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit1e-0963.5
NC_013037:6209424:621973662197366220260525Dyadobacter fermentans DSM 18053, complete genomeDNA polymerase III, epsilon subunit1e-0963.2
NC_013205:1548500:155584215558421556564723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit1e-0963.2
NC_005945:3359598:337683333768333377780948Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit epsilon2e-0962.8
NC_015589:1899329:1899329189932919036064278Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase III subunit alpha2e-0962.4
NC_007517:3430237:345016934501693450825657Geobacter metallireducens GS-15, complete genomeDNA polymerase III, epsilon subunit2e-0962.4
NC_017179:1378875:1381865138186513861634299Clostridium difficile BI1, complete genomeDNA polymerase III PolC-type3e-0962
NC_013315:1370000:1372091137209113763894299Clostridium difficile CD196 chromosome, complete genomeDNA polymerase III PolC-type3e-0962
NC_010184:3675424:3688149368814936924504302Bacillus weihenstephanensis KBAB4, complete genomeDNA polymerase III, alpha subunit9e-0960.5
NC_011969:3549000:3561396356139635656974302Bacillus cereus Q1 chromosome, complete genomeDNA polymerase iii polc9e-0960.5
NC_013169:1661135:1661135166113516628891755Kytococcus sedentarius DSM 20547, complete genomeexonuclease, DNA polymerase III, epsilon subunit family8e-0960.5
NC_011658:3603009:3617434361743436217354302Bacillus cereus AH187 chromosome, complete genomeDNA polymerase III PolC8e-0960.5
NC_016771:3555506:3569931356993135742324302Bacillus cereus NC7401, complete genomeDNA polymerase III subunit alpha8e-0960.5
NC_009664:3718927:3738654373865437404591806Kineococcus radiotolerans SRS30216, complete genomeDNA polymerase III, epsilon subunit1e-0860.1
NC_004722:3777907:3790222379022237945294308Bacillus cereus ATCC 14579, complete genomeDNA polymerase III subunit alpha1e-0860.1
NC_015389:2101841:2105296210529621082292934Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, epsilon subunit1e-0860.1
NC_011725:3821789:3834107383410738384084302Bacillus cereus B4264 chromosome, complete genomeDNA polymerase III PolC1e-0860.1
NC_014171:3701051:3713367371336737176684302Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III PolC1e-0860.1
NC_011772:3787500:3799826379982638041274302Bacillus cereus G9842, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-0860.1
NC_017208:3816753:3829460382946038337614302Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III PolC1e-0860.1
NC_014210:3742112:3757353375735337591401788Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, epsilon subunit1e-0859.7
NC_008340:2272692:2275718227571822779072190Alkalilimnicola ehrlichei MLHE-1, complete genomeputative PAS/PAC sensor protein1e-0859.7
NC_003909:3606177:3606177360617736090892913Bacillus cereus ATCC 10987, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-0859.7
NC_008149:3251196:327387932738793274643765Yersinia pestis Nepal516, complete genomeDNA polymerase III, epsilon chain3e-0858.9
NC_004088:3382148:340481234048123405576765Yersinia pestis KIM, complete genomeDNA polymerase III subunit epsilon3e-0858.9
NC_009381:1783886:182654518265451827309765Yersinia pestis Pestoides F chromosome, complete genomeDNA polymerase III subunit epsilon3e-0858.9
NC_014363:2035141:4254425472593006Olsenella uli DSM 7084 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-0858.9
NC_005957:3638750:3651061365106136553624302Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA polymerase III subunit alpha3e-0858.5
NC_015514:2414617:2418229241822924200911863Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA polymerase III subunit epsilon3e-0858.5
NC_013205:526281:554529554529555251723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit3e-0858.5
NC_009674:2551759:2564124256412425684254302Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDNA polymerase III PolC3e-0858.5
NC_014335:3567931:3580242358024235845434302Bacillus cereus biovar anthracis str. CI chromosome, completeDNA polymerase III subunit alpha5e-0857.8
NC_005945:3615623:3630085363008536343864302Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit alpha5e-0857.8
NC_007530:3616828:3629517362951736338184302Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA polymerase III subunit alpha5e-0857.8
NC_006274:3697255:3709943370994337142444302Bacillus cereus E33L, complete genomeDNA polymerase III subunit alpha5e-0857.8
NC_003997:3617000:3629390362939036336914302Bacillus anthracis str. Ames, complete genomeDNA polymerase III subunit alpha5e-0857.8
NC_011773:3651963:3664276366427636685774302Bacillus cereus AH820 chromosome, complete genomeDNA polymerase III PolC5e-0857.8
NC_012581:559182:6048696048696091704302Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA polymerase III PolC5e-0857.8
NC_012659:3617000:3629417362941736337184302Bacillus anthracis str. A0248, complete genomeDNA polymerase III PolC5e-0857.8
NC_009901:2915939:293148329314832932211729Shewanella pealeana ATCC 700345, complete genomeDNA polymerase III, epsilon subunit6e-0857.4
NC_017167:2298962:235386823538682354572705Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit epsilon7e-0857.4
NC_002939:1505701:151169815116981512243546Geobacter sulfurreducens PCA, complete genomeexonuclease7e-0857.4
NC_020453:896458:9170169170169191782163Agromonas oligotrophica S58 DNA, complete genomehypothetical protein1e-0757
NC_010531:708049:722835722835723545711Polynucleobacter necessarius STIR1, complete genomeDNA polymerase III, epsilon subunit9e-0857
NC_016779:3579743:3596109359610935990212913Bacillus cereus F837/76 chromosome, complete genomeDNA polymerase III subunit alpha1e-0756.6
NC_012472:3661912:3678278367827836811902913Bacillus cereus 03BB102, complete genomeDNA polymerase III, PolC-type1e-0756.6
NC_008600:3643905:3660271366027136631892919Bacillus thuringiensis str. Al Hakam, complete genomeDNA polymerase III, alpha subunit1e-0756.6
NC_009253:2139379:2156194215619421604744281Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA polymerase III subunit alpha1e-0756.6
NC_019970:1343670:1355741135574113599734233Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA polymerase III, alpha chain1e-0756.6
NC_012526:2155947:215999921599992160607609Deinococcus deserti VCD115, complete genomeputative DNA-directed DNA polymerase (DNA polymerase III, epsilon subunit)2e-0756.2
NC_007802:179780:185734185734186429696Jannaschia sp. CCS1, complete genomeDNA polymerase III, epsilon subunit3e-0755.5
NC_011898:513835:5162685162685205694302Clostridium cellulolyticum H10, complete genomeDNA polymerase III, alpha subunit3e-0755.5
NC_007164:822000:830685830685831353669Corynebacterium jeikeium K411, complete genomehypothetical protein5e-0754.7
CP002516:3863932:387441338744133875153741Escherichia coli KO11, complete genomeDNA polymerase III, epsilon subunit5e-0754.7
CP002185:234719:236750236750237490741Escherichia coli W, complete genomeDNA polymerase III, epsilon subunit5e-0754.7
NC_016902:3863932:387441338744133875153741Escherichia coli KO11FL chromosome, complete genomeDNA polymerase III subunit epsilon5e-0754.7
NC_008577:2818546:284401128440112844739729Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase III, epsilon subunit5e-0754.7
NC_016822:246715:248755248755249486732Shigella sonnei 53G, complete genomeDNA polymerase III subunit epsilon5e-0754.7
NC_010520:2585014:2616121261612126204194299Clostridium botulinum A3 str. Loch Maree, complete genomeDNA polymerase III, alpha subunit, Gram-positive type6e-0754.3
NC_015381:1318818:133573613357361336347612Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA polymerase III subunit epsilon6e-0754.3
NC_009488:1165927:118756911875691188237669Orientia tsutsugamushi str. Boryong, complete genomeDNA polymerase III epsilon chain6e-0754.3
NC_004347:2668000:268937626893762690104729Shewanella oneidensis MR-1, complete genomeDNA polymerase III, epsilon subunit9e-0753.9
NC_008322:2637646:265401326540132654741729Shewanella sp. MR-7, complete genomeDNA polymerase III, epsilon subunit1e-0653.5
NC_008321:2569315:258567025856702586398729Shewanella sp. MR-4, complete genomeDNA polymerase III, epsilon subunit1e-0653.5
NC_014311:1545175:154795115479511548679729Ralstonia solanacearum PSI07 chromosome, complete genomeDNA polymerase III epsilon subunit1e-0653.1
NC_014837:2354241:236160723616072362275669Pantoea sp. At-9b chromosome, complete genomeDNA polymerase III subunit epsilon1e-0653.1
NC_013850:1887556:189040318904031891062660Klebsiella variicola At-22 chromosome, complete genomeExonuclease RNase T and DNA polymerase III1e-0653.1
NC_014151:2312000:2313921231392123158161896Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, epsilon subunit1e-0653.1
NC_007484:667879:682483682483683100618Nitrosococcus oceani ATCC 19707, complete genomeExonuclease2e-0652.8
NC_017294:758992:7723037723037764964194Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA polymerase III PolC2e-0652.8
NC_012814:1465738:147026014702601470826567Bifidobacterium animalis subsp. lactis Bl-04, complete genomeDNA polymerase III alpha subunit2e-0652.8
NC_012815:1465670:147019214701921470758567Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeDNA polymerase III alpha subunit2e-0652.8
NC_013947:3080290:3097900309790030991321233Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeExonuclease RNase T and DNA polymerase III2e-0652.8
NC_005085:1269787:132217013221701322889720Chromobacterium violaceum ATCC 12472, complete genomeDNA-directed DNA polymerase, epsilon chain2e-0652.4
NC_009952:3596399:363066736306673631359693Dinoroseobacter shibae DFL 12, complete genomeDNA polymerase III subunit epsilon2e-0652.4
NC_008314:2686851:270009027000902700752663Ralstonia eutropha H16 chromosome 2, complete sequenceputative exonuclease2e-0652.4
NC_014960:1697818:1714903171490317177072805Anaerolinea thermophila UNI-1, complete genomeDnaQ exonuclease/DinG helicase family protein2e-0652.4
NC_011149:309556:313026313026313766741Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA polymerase III, epsilon subunit3e-0652
NC_021066:2226826:224604422460442246703660Raoultella ornithinolytica B6, complete genomeexodeoxyribonuclease X3e-0652
NC_012471:781063:7810637810637835342472Streptococcus equi subsp. equi 4047, complete genomeATP-dependent DNA helicase4e-0651.6
NC_016822:1339058:136436513643651365027663Shigella sonnei 53G, complete genomeexodeoxyribonuclease X4e-0651.6
NC_012658:2584355:2611499261149926157974299Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA polymerase III PolC4e-0651.6
NC_007384:1355060:138151613815161382178663Shigella sonnei Ss046, complete genomehypothetical protein4e-0651.6
NC_010516:2511035:2541591254159125458894299Clostridium botulinum B1 str. Okra, complete genomeDNA polymerase III, alpha subunit, Gram-positive type6e-0650.8