Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:2677964 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26779642678167204putative phage tail proteinQuickGO ontologyBLASTP
26781672678631465putative capsid completion proteinQuickGO ontologyBLASTP
26787252679375651putative phage terminaseQuickGO ontologyBLASTP
267937926804431065putative major capsid proteinQuickGO ontologyBLASTP
26804602681293834putative capsid proteinQuickGO ontologyBLASTP
268143626832021767probable terminase subunitQuickGO ontologyBLASTP
268320226842451044probable capsid portal proteinQuickGO ontologyBLASTP
26842942684989696hypothetical proteinBLASTP
268500926860731065hypothetical proteinBLASTP
268607026871341065hypothetical proteinBLASTP
26871442687362219hypothetical proteinBLASTP
26874582687691234hypothetical proteinBLASTP
26877032687891189hypothetical proteinBLASTP
268805926904612403hypothetical proteinBLASTP
26904522691312861DNA adenine methylaseQuickGO ontologyBLASTP
26913092691893585putative exonucleaseQuickGO ontologyBLASTP
26918902692117228hypothetical proteinBLASTP
26921172692350234hypothetical proteinBLASTP
26924182692759342hypothetical proteinBLASTP
26927232692923201hypothetical proteinBLASTP
26929312693440510phage regulatory proteinQuickGO ontologyBLASTP
26934732693715243phage regulatory proteinQuickGO ontologyBLASTP
26938322694464633phage repressor protein cIQuickGO ontologyBLASTP
269446826954931026phage integraseQuickGO ontologyBLASTP
26960262696784759probable bacteriophage integraseQuickGO ontologyBLASTP
269940827011081701putative phage geneQuickGO ontologyBLASTP