Pre_GI Gene

Some Help

Host: NC_010634 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010634:2124185 Yersinia pseudotuberculosis PB1/+, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21239742124204231phage-like proteinQuickGO ontology
212418521267402556replication gene AQuickGO ontologyBLASTP
21267372127600864C-5 cytosine-specific DNA methylaseQuickGO ontologyBLASTP
21275972128415819DNA adenine methylaseQuickGO ontologyBLASTP
21284122129065654exonuclease RNase T and DNA polymerase IIIQuickGO ontologyBLASTP
21291222129883762hypothetical proteinBLASTP
21299662130271306hypothetical proteinBLASTP
21303022130562261hypothetical proteinBLASTP
21305732130719147hypothetical protein
21307042131018315hypothetical proteinBLASTP
21310152131221207phage-like proteinQuickGO ontologyBLASTP
21312332131436204putative DNA-binding proteinQuickGO ontologyBLASTP
21314492131640192hypothetical protein
21317012132069369XRE family transcriptional regulatorQuickGO ontologyBLASTP
213209021337871698hypothetical proteinBLASTP
21338082134227420putative bacteriophage integraseQuickGO ontologyBLASTP
21342962134676381hypothetical proteinBLASTP
21346762135008333putative bacteriophage integraseQuickGO ontologyBLASTP
21353022135679378integrase family proteinQuickGO ontologyBLASTP
21359902136214225phage integrase family site specific recombinaseQuickGO ontologyBLASTP
21364172136839423hypothetical protein
21373942137516123hypothetical proteinBLASTP
21375342137686153hypothetical protein
21377602137933174hypothetical proteinBLASTP
21381252138307183hypothetical proteinBLASTP
21383372138642306hypothetical protein
21386682139012345Hcp1 family type VI secretion system effectorQuickGO ontologyBLASTP
21392322140191960integrase catalytic regionQuickGO ontologyBLASTP
21402632140682420transposase IS3IS911 family proteinQuickGO ontologyBLASTP
21415152141643129hypothetical protein
214170221429701269major facilitator transporterQuickGO ontologyBLASTP
214296721447001734UBATHIF-type NADFAD binding proteinQuickGO ontologyBLASTP
21446902145415726methyltransferase type 12QuickGO ontologyBLASTP
21454032146257855hypothetical proteinBLASTP
21462572147054798methyltransferase type 11QuickGO ontologyBLASTP
214705121482171167OrnDAPArg decarboxylase 2QuickGO ontologyBLASTP
21481922148749558ribosomal-protein-alanine N-acetyltransferase-like proteinQuickGO ontologyBLASTP