Pre_GI Gene

Some Help

Host: CP002185 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002185:234719 Escherichia coli W, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
234719235474756predicted hydroxyacylglutathione hydrolaseQuickGO ontologyBLASTP
235508236230723putative S-adenosyl-L-methionine-dependent methyltransferaseQuickGO ontologyBLASTP
236227236694468ribonuclease HI degrades RNA of DNA-RNA hybridsQuickGO ontologyBLASTP
236750237490741DNA polymerase III epsilon subunitQuickGO ontologyBLASTP
23762323769977tRNA-AspQuickGO ontologyBLASTP
238030238815786predicted aminopeptidaseQuickGO ontologyBLASTP
238952239431480conserved hypothetical proteinBLASTP
239441240355915predicted inner membrane proteinQuickGO ontologyBLASTP
240399240881483Hcp-related proteinQuickGO ontologyBLASTP
2409052422571353T6SS-associated proteinQuickGO ontologyBLASTP
2422682457923525IcmF-like proteinQuickGO ontologyBLASTP
2458112472231413ImpA domain-containing proteinQuickGO ontologyBLASTP
247228247971744T6SS-associated proteinQuickGO ontologyBLASTP
2479682507752808ClpV ATPaseQuickGO ontologyBLASTP
250784251545762T6SS-associated proteinQuickGO ontologyBLASTP
2515502528811332T6SS-associated proteinQuickGO ontologyBLASTP
252884253408525OM lipoproteinQuickGO ontologyBLASTP
2534052546851281Forkhead-associated proteinQuickGO ontologyBLASTP