Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:513835 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5138355151211287membrane-associated zinc metalloproteaseQuickGO ontologyBLASTP
51513251619310621-hydroxy-2-methyl-2-E-butenyl 4-diphosphate synthaseQuickGO ontologyBLASTP
5162685205694302DNA polymerase III alpha subunitQuickGO ontologyBLASTP
520889521347459protein of unknown function DUF150QuickGO ontologyBLASTP
5213815225291149NusA antitermination factorQuickGO ontologyBLASTP
522592522864273protein of unknown function DUF448QuickGO ontologyBLASTP
522857523195339ribosomal protein L7AeL30eS12eGadd45QuickGO ontologyBLASTP
5231825266673486translation initiation factor IF-2QuickGO ontologyBLASTP
526895527248354ribosome-binding factor AQuickGO ontologyBLASTP
527281528243963phosphoesterase RecJ domain proteinQuickGO ontologyBLASTP
528246529175930tRNA pseudouridine synthase BQuickGO ontologyBLASTP
529197530132936riboflavin biosynthesis protein RibFQuickGO ontologyBLASTP
5301535325252373NiFe hydrogenase maturation protein HypFQuickGO ontologyBLASTP
532624532848225hydrogenase assembly chaperone hypChupFQuickGO ontologyBLASTP
5328455339301086hydrogenase expressionformation protein HypDQuickGO ontologyBLASTP
5339705349831014hydrogenase expressionformation protein HypEQuickGO ontologyBLASTP
535022535750729ABC transporter relatedQuickGO ontologyBLASTP
535810536547738hypothetical proteinBLASTP