Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2256801 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2256801, End: 2258138, Length: 1338

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:4408201:4408201440820144095381338Citrobacter rodentium ICC168, complete genomeISCro3 transposase1e-153543
NC_012560:3303961:3306480330648033076461167Azotobacter vinelandii DJ, complete genomeTransposase, IS4 protein4e-136484
NC_021150:3303959:3306478330647833076441167Azotobacter vinelandii CA6, complete genomeTransposase, IS4 protein4e-136484
NC_013440:3947493:3961875396187539632241350Haliangium ochraceum DSM 14365, complete genometransposase IS4 family protein2e-79296
NC_010625:229478:2380132380132393411329Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetransposase IS4 family protein2e-77290
NC_012912:1788308:1815719181571918170441326Dickeya zeae Ech1591, complete genometransposase IS4 family protein5e-73275
NC_012912:242709:2468462468462481711326Dickeya zeae Ech1591, complete genometransposase IS4 family protein5e-73275
NC_007384:4095016:4114725411472541160711347Shigella sonnei Ss046, complete genomeIS4 ORF8e-68258
NC_011312:3060371:3060371306037130616961326Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completetransposase8e-68258
NC_004431:3513147:3532771353277135341201350Escherichia coli CFT073, complete genomeTransposase insG for insertion sequence element IS41e-67257
NC_007384:1696831:1711913171191317132591347Shigella sonnei Ss046, complete genomeIS4 ORF1e-67257
NC_016822:1781644:1784123178412317854691347Shigella sonnei 53G, complete genomeIS4 orf1e-67257
NC_016822:2678691:2678691267869126800371347Shigella sonnei 53G, complete genomeIS4 orf1e-67257
NC_000913:4494773:4500126450012645014541329Escherichia coli K12, complete genomeKpLE2 phage-like element; IS4 predicted transposase3e-67256
NC_010473:4596500:4601934460193446032621329Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; IS4 predicted transposase3e-67256
AC_000091:4501430:4506783450678345081111329Escherichia coli W3110 DNA, complete genomeIS4 predicted transposase3e-67256
NC_012759:4433500:4438861443886144401891329Escherichia coli BW2952 chromosome, complete genomeKpLE2 phage-like element; IS4 putative transposase3e-67256
NC_012947:3917619:3928785392878539301131329Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS4 family protein3e-67256
NC_012967:4473368:4483995448399544853231329Escherichia coli B str. REL606 chromosome, complete genomeIS4 putative transposase3e-67256
NC_011751:4992500:5010215501021550115611347Escherichia coli UMN026 chromosome, complete genomeputative IS4 transposase; KpLE2 phage-like element3e-67256
NC_004337:3590323:3917660391766039190061347Shigella flexneri 2a str. 301, complete genomeIS4 ORF2e-67256
NC_004337:3590323:3938517393851739398631347Shigella flexneri 2a str. 301, complete genomeIS4 ORF2e-67256
NC_017328:3655876:3674947367494736762931347Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF2e-67256
NC_007613:4119771:4131701413170141330171317Shigella boydii Sb227, complete genomeIS4 ORF2e-67256
NC_004741:4132056:4132056413205641333841329Shigella flexneri 2a str. 2457T, complete genomeIS4 orf2e-67256
NC_007384:2587876:2587876258787625892221347Shigella sonnei Ss046, complete genomeIS4 ORF5e-67255
NC_008258:269806:2883692883692897151347Shigella flexneri 5 str. 8401, complete genomeIS4 ORF4e-67255
NC_017328:3935185:3943321394332139446491329Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF4e-67255
NC_017047:3793000:3795224379522437965461323Rahnella aquatilis HX2 chromosome, complete genometransposase IS4 family protein2e-65250
NC_015061:3725921:3730563373056337318851323Rahnella sp. Y9602 chromosome, complete genometransposase IS4 family protein2e-65250
NC_017047:4379989:4402292440229244036141323Rahnella aquatilis HX2 chromosome, complete genometransposase IS4 family protein2e-65249
NC_013716:1178383:118878511887851189279495Citrobacter rodentium ICC168, complete genome1e-48194
NC_013716:1178383:118989111898911190355465Citrobacter rodentium ICC168, complete genome1e-44181
NC_015422:4508028:4509693450969345108981206Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS4 family protein6e-32139
NC_009256:2945059:2946142294614229473501209Burkholderia vietnamiensis G4 chromosome 1, complete sequencetransposase, IS4 family protein4e-31135
NC_009255:213245:2203062203062215141209Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase, IS4 family protein4e-31135
NC_009254:700891:7008917008917020991209Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase, IS4 family protein4e-31135
NC_004459:1679335:168432316843231684952630Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase and inactivated derivatives4e-29129
NC_015635:2001539:2008401200840120096151215Microlunatus phosphovorus NM-1, complete genomeputative transposase for insertion sequence element2e-27124
NC_015635:5222000:5235067523506752362811215Microlunatus phosphovorus NM-1, complete genomeputative transposase2e-27124
NC_015635:1906790:1911284191128419124231140Microlunatus phosphovorus NM-1, complete genomeputative transposase2e-27124
NC_015635:4097711:4123611412361141247921182Microlunatus phosphovorus NM-1, complete genomeputative transposase1e-27124
NC_004369:41236:4297842978441921215Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-27122
NC_004369:1268956:1282157128215712833711215Corynebacterium efficiens YS-314, complete genomeputative transposase5e-27122
NC_004369:437594:4467754467754479621188Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-26120
NC_019673:8057941:8062858806285880641231266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family2e-26120
NC_019673:1384795:1399984139998414012491266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family2e-26120
NC_019673:2051363:2104510210451021057841275Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family3e-26120
NC_015957:196000:2076502076502090081359Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS4 family protein8e-26118
NC_019673:3253650:3265193326519332664581266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family3e-25116
NC_009921:4035225:4059514405951440607791266Frankia sp. EAN1pec, complete genometransposase IS4 family protein3e-24113
NC_015656:632960:6491266491266503881263Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein7e-24112
NC_015656:632960:6453346453346465961263Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein7e-24112
NC_015656:2795784:2804695280469528059301236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein7e-24112
NC_015656:4850833:4855454485545448566891236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein7e-24112
NC_015656:3232809:3239387323938732406221236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein7e-24112
NC_015656:3300747:3306809330680933080441236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein7e-24112
NC_009921:6691089:6701579670157967028411263Frankia sp. EAN1pec, complete genometransposase IS4 family protein3e-23110
NC_009921:3255833:3272508327250832737701263Frankia sp. EAN1pec, complete genometransposase IS4 family protein3e-23110
NC_009921:7660795:7677440767744076787021263Frankia sp. EAN1pec, complete genometransposase IS4 family protein2e-23110
NC_009921:7660795:7674205767420576754671263Frankia sp. EAN1pec, complete genometransposase IS4 family protein2e-23110
NC_004459:1679335:168362916836291684276648Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein2e-23110
NC_013008:5411285:542069054206905420935246Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-22108
NC_011353:5455224:546462954646295464874246Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-22108
NC_013093:1909305:1910513191051319117331221Actinosynnema mirum DSM 43827, complete genometransposase IS4 family protein2e-22107
NC_016109:5768000:5795206579520657964471242Kitasatospora setae KM-6054, complete genomeputative transposase3e-22106
NC_002695:5381576:539098153909815391211231Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-22105
NC_009953:3509229:3529981352998135313361356Salinispora arenicola CNS-205 chromosome, complete genometransposase IS4 family protein2e-21103
NC_015663:770485:775341775341775568228Enterobacter aerogenes KCTC 2190 chromosome, complete genomeISCro3 transposase5e-1996.3
NC_007777:2543475:2556883255688325581211239Frankia sp. CcI3, complete genometransposase, IS41e-1894.7
NC_017328:2516000:251608325160832516706624Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF2e-1894
NC_004741:2456297:245658024565802457185606Shigella flexneri 2a str. 2457T, complete genomeIS4 orf2e-1894
NC_004337:2478461:247846124784612479084624Shigella flexneri 2a str. 301, complete genomeIS4 ORF2e-1894
NC_015424:2462522:246967924696792470422744Aeromonas veronii B565 chromosome, complete genomeputative IS4 transposase; KpLE2 phage-like element3e-1790.1
NC_009921:6691089:6705062670506267063391278Frankia sp. EAN1pec, complete genometransposase IS4 family protein3e-1790.1
NC_003155:365500:3710093710093726371629Streptomyces avermitilis MA-4680, complete genomeIS4 family transposase8e-1788.6
NC_009656:115390:1249551249551262261272Pseudomonas aeruginosa PA7 chromosome, complete genometransposase DDE domain-containing protein8e-1582
NC_011768:79297:8647786477877451269Desulfatibacillum alkenivorans AK-01, complete genometransposase IS4 family protein8e-1582
NC_015422:4508028:4545748454574845471271380Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS4 family protein1e-1481.3
NC_013716:5201097:526948252694825269871390Citrobacter rodentium ICC168, complete genome6e-1479
NC_008027:5576458:5584103558410355854881386Pseudomonas entomophila L48, complete genometransposase, IS4 family1e-1378.2
NC_007948:1695500:1712930171293017143061377Polaromonas sp. JS666, complete genometransposase, IS42e-1273.9
NC_015410:3093465:3106275310627531076541380Pseudomonas mendocina NK-01 chromosome, complete genomeIS4 family transposase2e-1170.9
NC_016943:1037000:1049565104956510509021338Blastococcus saxobsidens DD2, complete genometransposase6e-1169.3
NC_018691:318662:3297063297063311331428Alcanivorax dieselolei B5 chromosome, complete genomePutative transposase, IS4 family3e-1067
NC_009921:2565640:257536525753652576321957Frankia sp. EAN1pec, complete genomeinsertion element conserved hypothetical protein4e-1066.2
NC_021184:3571014:3588119358811935894231305Desulfotomaculum gibsoniae DSM 7213, complete genometransposase family protein5e-0962.8
NC_015556:130437:146600146600147196597Pseudomonas fulva 12-X chromosome, complete genome4e-0859.7
NC_019940:3660754:3669951366995136711861236Thioflavicoccus mobilis 8321 chromosome, complete genometransposase family protein6e-0858.9
NC_013716:4306695:431717643171764317322147Citrobacter rodentium ICC168, complete genome1e-0758.2
NC_015214:437733:4674624674624688231362Lactobacillus acidophilus 30SC chromosome, complete genomeIS4 family transposase9e-0755.5
NC_009953:4748147:475778747577874758389603Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein3e-0653.5
NC_012967:12161:1544315443165551113Escherichia coli B str. REL606 chromosome, complete genomeIS186/IS421 transposase5e-0652.8
NC_012947:3753375:3767167376716737682791113Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS4 family protein5e-0652.8
NC_009800:12162:1556015560166721113Escherichia coli HS, complete genomeIS186, transposase5e-0652.8
NC_010468:3970995:3985628398562839867401113Escherichia coli ATCC 8739, complete genometransposase IS4 family protein5e-0652.8
NC_009837:92000:1036701036701052411572Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceCvaB, IS186 transposase7e-0652.4