Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:5455224 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
545522454615656342DEADDEAH box helicaseQuickGO ontologyBLASTP
546156254636762115ATP-dependent DNA helicase UvrDREP familyQuickGO ontologyBLASTP
54651705466150981hypothetical proteinBLASTP
546621554673211107N-acetylneuraminic acid mutarotaseQuickGO ontologyBLASTP
54673415467889549oligogalacturonate-specific porin proteinQuickGO ontologyBLASTP
54682955468423129hypothetical protein
54687225468859138hypothetical proteinBLASTP
54695135470115603tyrosine recombinaseQuickGO ontologyBLASTP
54705935471189597tyrosine recombinaseQuickGO ontologyBLASTP
54716545472202549type-1 fimbrial protein-like proteinQuickGO ontologyBLASTP
54723095472806498type-1 fimbrial protein-like proteinQuickGO ontologyBLASTP
54728435473568726chaperone protein FimCQuickGO ontologyBLASTP
547363554762712637outer membrane usher protein fimDQuickGO ontologyBLASTP
54762815476811531fimbrial protein FimFQuickGO ontologyBLASTP
54768245477327504protein fimGQuickGO ontologyBLASTP
54773475478249903protein FimHQuickGO ontologyBLASTP
547842354797661344fructuronate transporterQuickGO ontologyBLASTP