Pre_GI: BLASTP Hits

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Query: NC_004061:498483:511562 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome

Start: 511562, End: 512446, Length: 885

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is the symbiont of the aphid Schizaphis graminum and contains a large circular chromosome. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017253:509494:511378511378512226849Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,geranyltranstransferase1e-79296
NC_002528:505951:510476510476511324849Buchnera aphidicola str. APS (Acyrthosiphon pisum), completegeranyltranstransferase1e-79296
NC_015663:2694373:269625426962542697153900Enterobacter aerogenes KCTC 2190 chromosome, complete genomegeranyltranstransferase9e-49193
NC_020181:2714559:274864327486432749542900Enterobacter aerogenes EA1509E, complete genomeDimethylallyltransferase @ (2E, 6E)-farnesyl diphosphate synthase9e-49193
NC_017328:385552:387439387439388338900Shigella flexneri 2002017 chromosome, complete genomegeranyltranstransferase4e-47188
NC_004337:367687:369574369574370473900Shigella flexneri 2a str. 301, complete genomegeranyltranstransferase (farnesyldiphosphate synthase)4e-47188
NC_004741:366822:368709368709369608900Shigella flexneri 2a str. 2457T, complete genomegeranyltranstransferase (farnesyldiphosphate synthase)4e-47188
NC_008258:401786:403673403673404572900Shigella flexneri 5 str. 8401, complete genomegeranyltranstransferase (farnesyldiphosphate synthase)6e-47187
NC_002940:1065246:107731610773161078242927Haemophilus ducreyi 35000HP, complete genomefarnesyl-diphosphate synthase5e-39161
NC_008369:514995:532493532493533374882Francisella tularensis subsp. holarctica OSU18, complete genomegeranyltranstransferase5e-34144
NC_007880:508407:528771528771529652882Francisella tularensis subsp. holarctica, complete genomeGeranyltranstransferase5e-34144
NC_009257:338994:359353359353360234882Francisella tularensis subsp. tularensis WY96-3418 chromosome,polyprenyl synthetase1e-33144
NC_010677:353839:374037374037374918882Francisella tularensis subsp. mediasiatica FSC147, complete genomegeranyl diphosphate synthase/farnesyl diphosphate synthase1e-33143
NC_013889:413909:438514438514439407894Thioalkalivibrio sp. K90mix chromosome, complete genomePolyprenyl synthetase9e-33140
NC_014355:665000:668272668272669252981Candidatus Nitrospira defluvii, complete genomegeranyltranstransferase3e-29129
NC_014833:2225233:222875522287552229648894Ruminococcus albus 7 chromosome, complete genomepolyprenyl synthetase3e-29129
NC_011146:1429836:145341914534191454306888Geobacter bemidjiensis Bem, complete genomePolyprenyl synthetase5e-29128
NC_006351:2398403:241801624180162418900885Burkholderia pseudomallei K96243 chromosome 2, complete sequencegeranyltranstransferase8e-29127
NC_009075:2428248:244786924478692448753885Burkholderia pseudomallei 668 chromosome II, complete sequencegeranyltranstransferase8e-29127
NC_020829:809457:813903813903814790888Pseudomonas denitrificans ATCC 13867, complete genomegeranyltranstransferase6e-27121
NC_019940:1963000:197579219757921976688897Thioflavicoccus mobilis 8321 chromosome, complete genomegeranylgeranyl pyrophosphate synthase3e-26119
NC_013517:2607043:260704326070432607915873Sebaldella termitidis ATCC 33386, complete genomePolyprenyl synthetase2e-26119
NC_016745:1257397:127289512728951273782888Oceanimonas sp. GK1 chromosome, complete genomegeranyltranstransferase1e-25117
NC_015722:4539:710671067960855Candidatus Midichloria mitochondrii IricVA chromosome, completegeranyltranstransferase1e-25116
NC_007604:743738:767721767721768626906Synechococcus elongatus PCC 7942, complete genomegeranylgeranyl pyrophosphate synthase2e-25116
NC_014932:1387818:139501413950141395919906Bartonella clarridgeiae 73, complete genomegeranyltranstransferase1e-24113
NC_017249:7917586:7954039795403979550461008Bradyrhizobium japonicum USDA 6, complete genomefarnesyl diphosphate synthase5e-23108
NC_017059:1727095:174353317435331744492960Rhodospirillum photometricum DSM 122, complete genomeFarnesyl-diphosphate synthase5e-23108
NC_008783:119758:135152135152136054903Bartonella bacilliformis KC583, complete genomepolyprenyl synthetase4e-23108
NC_014926:6652:105151051511399885Thermovibrio ammonificans HB-1 chromosome, complete genomePolyprenyl synthetase4e-23108
NC_005773:694990:710629710629711516888Pseudomonas syringae pv. phaseolicola 1448A, complete genomegeranyltranstransferase2e-22106
NC_014654:1548194:156186515618651562749885Halanaerobium sp. 'sapolanicus' chromosome, complete genomePolyprenyl synthetase2e-22106
NC_008599:29000:538385383854671834Campylobacter fetus subsp. fetus 82-40, complete genomegeranyltranstransferase4e-22105
NC_009699:2056500:206932520693252070197873Clostridium botulinum F str. Langeland chromosome, complete genomegeranyltranstransferase2e-21103
NC_010520:2061502:207709920770992077971873Clostridium botulinum A3 str. Loch Maree, complete genomegeranyltranstransferase2e-21103
NC_017297:2054000:206942320694232070295873Clostridium botulinum F str. 230613 chromosome, complete genomegeranyltranstransferase6e-21101
NC_010161:2381195:238119523811952382100906Bartonella tribocorum CIP 105476, complete genomegeranyltranstransferase1e-20100
NC_010163:1361217:138402013840201384856837Acholeplasma laidlawii PG-8A chromosome, complete genomegeranyltranstransferase2e-2099.8
NC_010516:1999500:201227620122762013148873Clostridium botulinum B1 str. Okra, complete genomegeranyltranstransferase2e-2099.8
NC_009850:413093:430422430422431282861Arcobacter butzleri RM4018, complete genomegeranyltranstransferase1e-1997.4
NC_017187:387735:408064408064408924861Arcobacter butzleri ED-1, complete genomegeranyltranstransferase1e-1997.4
NC_013422:1755875:180168718016871802616930Halothiobacillus neapolitanus c2, complete genomePolyprenyl synthetase6e-1994.7
NC_011979:2892119:289211928921192893012894Geobacter sp. FRC-32, complete genomePolyprenyl synthetase4e-1892
NC_002939:1926084:192796419279641928857894Geobacter sulfurreducens PCA, complete genomegeranyltranstransferase4e-1892
NC_020260:312805:315162315162316067906Cronobacter sakazakii Sp291, complete genomegeranylgeranyl pyrophosphate synthase CrtE9e-1890.9
NC_007575:319119:335606335606336454849Sulfurimonas denitrificans DSM 1251, complete genomepolyprenyl synthetase2e-1790.1
NC_014219:2491021:249102124910212491914894Bacillus selenitireducens MLS10 chromosome, complete genomePolyprenyl synthetase2e-1789.7
NC_016047:2480921:250644525064452507335891Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completegeranyltranstransferase3e-1789.4
NC_018645:2301705:231999623199962320913918Desulfobacula toluolica Tol2, complete genomegeranyltranstransferase (Farnesyl-diphosphate synthase) IspA9e-1787.8
NC_009662:222964:243916243916244788873Nitratiruptor sp. SB155-2, complete genomegeranyltranstransferase6e-1684.7
NC_013939:913890:945349945349946251903Deferribacter desulfuricans SSM1, complete genomegeranyl diphosphate synthase / farnesyl diphosphate synthase8e-1684.3
NC_015518:614806:619451619451620431981Acidianus hospitalis W1 chromosome, complete genomefarnesyltranstransferase1e-1584
NC_014122:685701:707759707759708712954Methanocaldococcus infernus ME chromosome, complete genomePolyprenyl synthetase4e-1582.4
NC_019977:1621939:162475016247501625715966Methanomethylovorans hollandica DSM 15978, complete genomegeranylgeranyl pyrophosphate synthase2e-1479.7
NC_016629:3254000:327177332717733272669897Desulfovibrio africanus str. Walvis Bay chromosome, completefarnesyltranstransferase4e-1479
NC_015435:120334:132275132275133258984Metallosphaera cuprina Ar-4 chromosome, complete genomegeranyltranstransferase3e-1375.9
NC_009715:1877825:187692618769261877828903Campylobacter curvus 525.92 chromosome, complete genomegeranyltranstransferase4e-1375.5
NC_013887:1287783:128914612891461290099954Methanocaldococcus sp. FS406-22 chromosome, complete genomePolyprenyl synthetase6e-1374.7
NC_000909:762859:782858782858783841984Methanocaldococcus jannaschii DSM 2661, complete genomebifunctional short chain isoprenyl diphosphate synthase (idsA)1e-1273.9
NC_012622:1944544:195639119563911957386996Sulfolobus islandicus Y.G.57.14 chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_017275:1909403:192125119212511922246996Sulfolobus islandicus HVE10/4 chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_017276:1772146:178399317839931784988996Sulfolobus islandicus REY15A chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_012588:1874242:188608918860891887084996Sulfolobus islandicus M.14.25 chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_012632:1980332:199218519921851993180996Sulfolobus islandicus M.16.27 chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_012589:2006323:201817020181702019165996Sulfolobus islandicus L.S.2.15, complete genomeFarnesyltranstransferase2e-1273.6
NC_012623:663020:668334668334669329996Sulfolobus islandicus Y.N.15.51 chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_012726:1878503:189035018903501891345996Sulfolobus islandicus M.16.4 chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_013769:1993557:200540420054042006399996Sulfolobus islandicus L.D.8.5 chromosome, complete genomefarnesyltranstransferase2e-1273.6
NC_003106:2060628:206717820671782068167990Sulfolobus tokodaii str. 7, complete genomehypothetical geranylgeranyl pyrophosphate synthetase3e-1272.8
NC_007181:55685:694966949670488993Sulfolobus acidocaldarius DSM 639, complete genomegeranylgeranyl pyrophosphate synthetase6e-1271.6
NC_013741:1304000:132428413242841325267984Archaeoglobus profundus DSM 5631, complete genomeDimethylallyltranstransferase7e-1271.6
NC_014374:318528:3281343281343291501017Acidilobus saccharovorans 345-15 chromosome, complete genomeFarnesylgeranyl diphosphate synthase1e-1170.9
NC_003911:253400:269616269616270482867Silicibacter pomeroyi DSS-3, complete genomefarnesyl diphosphate synthase9e-1270.9
NC_007681:979815:989514989514990497984Methanosphaera stadtmanae DSM 3091, complete genomeIdsA2e-1170.5
NC_002754:46297:512075120752205999Sulfolobus solfataricus P2, complete genomeGeranylgeranyl pyrophosphate synthetase (gdS-1)2e-1170.5
NC_015574:1541613:155130015513001552286987Methanobacterium sp. SWAN-1 chromosome, complete genomeDimethylallyltranstransferase2e-1170.5
NC_015931:857327:868166868166869158993Pyrolobus fumarii 1A, complete genomepolyprenyl synthetase2e-1170.1
NC_012483:996555:102990310299031030826924Acidobacterium capsulatum ATCC 51196, complete genomefarnesyltranstransferase5e-1168.6
NC_019673:6778401:6796167679616767972071041Saccharothrix espanaensis DSM 44229 complete genomePolyprenyl synthetase9e-1064.3
NC_003551:723901:735536735536736510975Methanopyrus kandleri AV19, complete genomeGeranylgeranyl pyrophosphate synthase2e-0963.5
NC_019940:3267436:328835132883513289220870Thioflavicoccus mobilis 8321 chromosome, complete genomegeranylgeranyl pyrophosphate synthase3e-0962.8
NC_009883:871594:885181885181886164984Rickettsia bellii OSU 85-389, complete genomeOctaprenyl-diphosphate synthase5e-0858.5
NC_007940:782207:7968007968007978041005Rickettsia bellii RML369-C, complete genomeOctaprenyl-diphosphate synthase5e-0858.5
NC_011725:1486635:149869814986981499660963Bacillus cereus B4264 chromosome, complete genomeheptaprenyl diphosphate synthase component II6e-0858.5
NC_008698:560529:5605295605295615421014Thermofilum pendens Hrk 5, complete genomeGeranyltranstransferase9e-0857.8
NC_000962:3781501:3797437379743737984891053Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE) (POLYPRENYL DIPHOSPHATE SYNTHASE)2e-0757
NC_009525:3794000:3806560380656038076121053Mycobacterium tuberculosis H37Ra, complete genomeputative polyprenyl synthetase IdsB2e-0757
NC_017026:3754000:376668937666893767645957Mycobacterium tuberculosis RGTB327 chromosome, complete genomepolyprenyl synthetase3e-0756.2
NC_002945:3735141:3749720374972037507721053Mycobacterium bovis AF2122/97, complete genomepolyprenyl synthetase IdsB3e-0756.2
NC_008769:3769065:3783644378364437846961053Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative polyprenyl synthetase idsB3e-0756.2
NC_009565:3793976:3808554380855438096061053Mycobacterium tuberculosis F11, complete genomepolyprenyl synthetase idsB3e-0756.2
NC_012207:3766978:3781557378155737826091053Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative polyprenyl synthetase3e-0756.2
NC_012943:3777371:3791949379194937930011053Mycobacterium tuberculosis KZN 1435 chromosome, complete genomepolyprenyl synthetase3e-0756.2
NC_016768:3774105:3788683378868337897351053Mycobacterium tuberculosis KZN 4207 chromosome, complete genomepolyprenyl synthetase idsB3e-0756.2
NC_016804:3753243:3763009376300937640611053Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative polyprenyl synthetase3e-0756.2
NC_002755:3773734:3788312378831237893761065Mycobacterium tuberculosis CDC1551, complete genomepolyprenyl synthetase3e-0756.2
NC_019950:3818000:382920138292013830154954Mycobacterium canettii CIPT 140060008 complete genomePutative polyprenyl synthetase IdsB (polyprenyl transferase) (polyprenyl diphosphate synthase)3e-0755.8
NC_015380:859424:8731288731288741441017Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeoctaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate syn3e-0755.8
NC_015848:3851230:3865810386581038668621053Mycobacterium canettii CIPT 140010059, complete genomeputative polyprenyl synthetase IDSB5e-0755.5
NC_018876:863314:877396877396878361966Methanolobus psychrophilus R15 chromosome, complete genomefarnesyltranstransferase5e-0755.5
NC_019977:828427:844786844786845685900Methanomethylovorans hollandica DSM 15978, complete genomegeranylgeranyl pyrophosphate synthase5e-0755.1
NC_009012:686740:690963690963691919957Clostridium thermocellum ATCC 27405, complete genomeTrans-hexaprenyltranstransferase2e-0653.1
NC_009515:1409912:146627614662761467268993Methanobrevibacter smithii ATCC 35061, complete genomebifunctional short chain isoprenyl diphosphate synthase, IdsA3e-0652.4
NC_005061:96536:101185101185102159975Candidatus Blochmannia floridanus, complete genomeoctaprenyl-diphosphate synthase4e-0652.4
NC_014909:86000:105536105536106510975Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeoctaprenyl-diphosphate synthase4e-0652.4
NC_018681:5490963:5501354550135455023911038Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative polyprenyl synthetase IDSB5e-0652