Pre_GI Gene

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Host: NC_007604 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007604:743738 Synechococcus elongatus PCC 7942, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7437387465902853Phage tail tape measure protein TP901 core regionQuickGO ontologyBLASTP
746590747510921hypothetical proteinBLASTP
747510747722213hypothetical proteinBLASTP
7477197491611443phage late control gene D protein GPDQuickGO ontologyBLASTP
749183749431249hypothetical protein
749431750009579hypothetical proteinBLASTP
750406750870465chain A D20c mutant of T4 lysozymeQuickGO ontologyBLASTP
751277751957681hypothetical proteinBLASTP
751959752381423hypothetical proteinBLASTP
7525747539531380hypothetical proteinBLASTP
753963754553591hypothetical proteinBLASTP
754779755507729hypothetical proteinBLASTP
756010756561552hypothetical proteinBLASTP
756989757318330transcriptional regulator XRE familyQuickGO ontologyBLASTP
757356757595240transcriptional regulator XRE familyQuickGO ontologyBLASTP
757839758327489hypothetical protein
758390759037648DNA-damage-inducible proteinQuickGO ontologyBLASTP
759413759847435hypothetical proteinBLASTP
76027876035376tRNA-ArgQuickGO ontology
760522761178657hypothetical proteinBLASTP
761226762128903hypothetical proteinBLASTP
7621597636431485hypothetical proteinBLASTP
7636407648541215hypothetical proteinBLASTP
764984765577594hypothetical proteinBLASTP
765592766197606conserved hypothetical protein YCF52QuickGO ontologyBLASTP
766216767103888esteraseQuickGO ontologyBLASTP
767242767721480hypothetical proteinBLASTP
767721768626906geranylgeranyl pyrophosphate synthaseQuickGO ontologyBLASTP