Pre_GI Gene

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Host: NC_009515 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009515:1409912 Methanobrevibacter smithii ATCC 35061, complete genome

Host Lineage: Methanobrevibacter smithii; Methanobrevibacter; Methanobacteriaceae; Methanobacteriales; Euryarchaeota; Archaea

General Information: Methanobrevibacter smithii ATCC 35061 (DSM 861) (strain PS) was isolated from a sewage digester in Gainesville, Florida, USA. Sewage digester isolate. Human gut methanogen. Methanobrevibacter smithii can be isolated from anoxic environments such as anaerobic digesters, anaerobic soil and sediment, and the gastrointestinal tracts of humans, ruminants and other animals. This organism is the dominant archaeal symbiont found in the human gut.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14099121410826915ribokinase family sugar kinaseQuickGO ontologyBLASTP
14109731411842870LysR family transcriptional regulatorQuickGO ontologyBLASTP
14119161412506591sugar phosphate isomerase involved in capsule formation GutQQuickGO ontologyBLASTP
14125151413264750formate dehydrogenase accessory protein FdhD FdhDQuickGO ontologyBLASTP
141339814144981101ironIII ABC transporter substrate-binding componentQuickGO ontologyBLASTP
141450814155211014ironIII ABC transporter permease componentQuickGO ontologyBLASTP
14155121416315804ironIII ABC transporter ATPase componentQuickGO ontologyBLASTP
14163251416903579tungsten formylmethanofuran dehydrogenase subunit E FwdEQuickGO ontologyBLASTP
141697614210884113adhesin-like proteinQuickGO ontologyBLASTP
142121914235222304adhesin-like proteinQuickGO ontologyBLASTP
142392314258721950adhesin-like proteinQuickGO ontologyBLASTP
14259781426637660peptide ABC transporter permeaseQuickGO ontology
14266491427290642biopolymer transport proteinQuickGO ontologyBLASTP
14272961427595300hypothetical proteinBLASTP
14281501428953804formatenitrite transporter FdhCQuickGO ontologyBLASTP
142898814310962109formate dehydrogenase alpha subunit FdhAQuickGO ontologyBLASTP
143110314323081206formate dehydrogenase beta subunit FdhBQuickGO ontologyBLASTP
14323871433316930molybdenum cofactor biosynthesis protein AQuickGO ontologyBLASTP
143332114343701050molybdopterin-guanine dinucleotide biosynthesis protein B MobBQuickGO ontologyBLASTP
14347581435219462tungsten formylmethanofuran dehydrogenase subunit E FwdEQuickGO ontologyBLASTP
143522214363191098tungsten formylmethanofuran dehydrogenase subunit F FwdFQuickGO ontologyBLASTP
14363281436558231tungsten formylmethanofuran dehydrogenase subunit G FwdGQuickGO ontologyBLASTP
14365701437139570tungsten formylmethanofuran dehydrogenase subunit D FwdDQuickGO ontologyBLASTP
143712914385051377tungsten formylmethanofuran dehydrogenase subunit B FwdBQuickGO ontologyBLASTP
143851214402241713tungsten formylmethanofuran dehydrogenase subunit A FwdAQuickGO ontologyBLASTP
14402301441105876tungsten formylmethanofuran dehydrogenase subunit C FwdCQuickGO ontologyBLASTP
14412971441590294hypothetical proteinBLASTP
14416991441989291hypothetical proteinBLASTP
144199514436741680hypothetical proteinBLASTP
144376314451361374glutamine synthetase GlnAQuickGO ontologyBLASTP
144550914467141206putative transposaseQuickGO ontologyBLASTP
144681114487961986UvrDRep family helicaseQuickGO ontologyBLASTP
144879314505771785hypothetical proteinBLASTP
14505921451155564LemA proteinQuickGO ontologyBLASTP
14513761452290915exopolyphosphatase GppAQuickGO ontologyBLASTP
145229014544312142polyphosphate kinaseQuickGO ontologyBLASTP
1454656145474085tRNA-SerQuickGO ontology
1454936145537944430S ribosomal protein S13PQuickGO ontologyBLASTP
1455471145600753730S ribosomal protein S4QuickGO ontologyBLASTP
1456019145641139330S ribosomal protein S11PQuickGO ontologyBLASTP
14564241457248825DNA-directed RNA polymerase subunit DQuickGO ontologyBLASTP
1457248145761336650S ribosomal protein L18eQuickGO ontologyBLASTP
14576321458054423ribosomal protein L13pQuickGO ontologyBLASTP
1458073145847440230S ribosomal protein S9PQuickGO ontologyBLASTP
14585261458696171DNA-directed RNA polymerase subunit NQuickGO ontologyBLASTP
14587661458963198DNA-directed RNA polymerase subunit K RpoKQuickGO ontologyBLASTP
14590511459461411hypothetical protein
14594601460347888enolaseQuickGO ontologyBLASTP
14603711460565195ferredoxinQuickGO ontologyBLASTP
1460618146121459730S ribosomal protein S2QuickGO ontologyBLASTP
14612241462072849dioxygenaseQuickGO ontologyBLASTP
14620841463046963mevalonate kinaseQuickGO ontologyBLASTP
14630521463849798kinaseQuickGO ontologyBLASTP
146385714649031047isopentenyl pyrophosphate isomeraseQuickGO ontologyBLASTP
146491014662741365RNA hydrolaseQuickGO ontologyBLASTP
14662761467268993bifunctional short chain isoprenyl diphosphate synthase IdsAQuickGO ontologyBLASTP
146753114690481518hypothetical proteinBLASTP
14690261469811786transcriptional regulatorQuickGO ontologyBLASTP