Pre_GI: OUP Neighbours

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Query: NC_008800:1497746 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

D: 33.823

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

Number of Neighbours: 110




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_017168:2892000Yersinia pestis A1122 chromosome, complete genome85.9099 %Subject ←→ Query27.5961
NC_017160:2740870Yersinia pestis D182038 chromosome, complete genome85.5944 %Subject ←→ Query28.2618
NC_010634:3269010*Yersinia pseudotuberculosis PB1/+, complete genome75.864 %Subject ←→ Query28.5333
NC_017168:601928Yersinia pestis A1122 chromosome, complete genome75.2175 %Subject ←→ Query28.5688
NC_015224:279037Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,79.5129 %Subject ←→ Query28.7938
NC_017265:2557476Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,75.383 %Subject ←→ Query29.2631
NC_017154:478000Yersinia pestis D106004 chromosome, complete genome75.3033 %Subject ←→ Query29.2771
NC_012912:4737703Dickeya zeae Ech1591, complete genome75.1379 %Subject ←→ Query29.5142
NC_012125:3905782Salmonella enterica subsp. enterica serovar Paratyphi C strain76.1489 %Subject ←→ Query29.6328
NC_014029:536000Yersinia pestis Z176003 chromosome, complete genome75.2849 %Subject ←→ Query30.639
NC_017154:902739Yersinia pestis D106004 chromosome, complete genome79.3566 %Subject ←→ Query30.8256
NC_009708:1694685Yersinia pseudotuberculosis IP 31758 chromosome, complete genome85.7476 %Subject ←→ Query30.9126
NC_006155:3040769Yersinia pseudotuberculosis IP 32953, complete genome85.7659 %Subject ←→ Query31.1041
NC_006511:3759550Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.6342 %Subject ←→ Query31.1345
NC_010634:2960000Yersinia pseudotuberculosis PB1/+, complete genome86.6146 %Subject ←→ Query31.2014
NC_014029:961522Yersinia pestis Z176003 chromosome, complete genome79.5129 %Subject ←→ Query31.5068
NC_017168:3948514Yersinia pestis A1122 chromosome, complete genome75.3952 %Subject ←→ Query31.5192
NC_011149:3895921Salmonella enterica subsp. enterica serovar Agona str. SL483,75.2482 %Subject ←→ Query31.5601
NC_004088:1801819Yersinia pestis KIM, complete genome85.7721 %Subject ←→ Query31.8002
NC_004631:3841975Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.3248 %Subject ←→ Query32.0647
NC_010102:3919999Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.4167 %Subject ←→ Query32.0708
NC_003197:3971905Salmonella typhimurium LT2, complete genome75.0153 %Subject ←→ Query32.0829
NC_008149:2411161Yersinia pestis Nepal516, complete genome85.8395 %Subject ←→ Query32.2349
NC_014029:1512605Yersinia pestis Z176003 chromosome, complete genome76.4645 %Subject ←→ Query32.2364
NC_011083:3985618Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.1593 %Subject ←→ Query32.4599
NC_003198:3855157Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.4718 %Subject ←→ Query32.5632
NC_010465:1724000Yersinia pseudotuberculosis YPIII, complete genome85.7047 %Subject ←→ Query32.6727
NC_010634:1565788Yersinia pseudotuberculosis PB1/+, complete genome76.9271 %Subject ←→ Query33.0113
NC_017160:905783Yersinia pestis D182038 chromosome, complete genome78.5999 %Subject ←→ Query33.1867
NC_006155:1567306Yersinia pseudotuberculosis IP 32953, complete genome76.8444 %Subject ←→ Query33.2342
NC_017168:4363000Yersinia pestis A1122 chromosome, complete genome77.2947 %Subject ←→ Query33.4186
NC_017154:3139614Yersinia pestis D106004 chromosome, complete genome85.9099 %Subject ←→ Query33.4691
NC_009381:588137Yersinia pestis Pestoides F chromosome, complete genome79.1942 %Subject ←→ Query33.692
NC_003143:2849377Yersinia pestis CO92, complete genome86.0539 %Subject ←→ Query33.8521
NC_010159:1861465Yersinia pestis Angola, complete genome86.0999 %Subject ←→ Query33.8947
NC_005810:2613456Yersinia pestis biovar Microtus str. 91001, complete genome86.0846 %Subject ←→ Query33.9433
NC_015224:3191000Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,89.2249 %Subject ←→ Query34.0665
NC_013592:3618248*Dickeya dadantii Ech586, complete genome75.6679 %Subject ←→ Query34.4581
NC_011415:11381*Escherichia coli SE11 chromosome, complete genome77.2518 %Subject ←→ Query34.6212
NC_011741:11381*Escherichia coli IAI1 chromosome, complete genome76.9945 %Subject ←→ Query34.732
NC_017265:1521276Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,85.6311 %Subject ←→ Query35.1936
NC_013421:1545386Pectobacterium wasabiae WPP163, complete genome75.9988 %Subject ←→ Query35.9253
NC_013421:1143500Pectobacterium wasabiae WPP163, complete genome76.2776 %Subject ←→ Query36.4256
NC_012962:3568046Photorhabdus asymbiotica, complete genome75.4626 %Subject ←→ Query37.813
NC_013892:853366Xenorhabdus bovienii SS-2004 chromosome, complete genome76.6085 %Subject ←→ Query38.0885
NC_016863:3933848Salmonella enterica subsp. enterica serovar Typhimurium str. UK-175.5545 %Subject ←→ Query39.056
NC_011147:3755725Salmonella enterica subsp. enterica serovar Paratyphi A str75.7751 %Subject ←→ Query39.0564
NC_016810:3993863Salmonella enterica subsp. enterica serovar Typhimurium str75.5239 %Subject ←→ Query39.1598
NC_016857:3993864Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7475.5147 %Subject ←→ Query39.189
NC_016856:3985597Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S75.0153 %Subject ←→ Query39.3604
NC_011080:3941909Salmonella enterica subsp. enterica serovar Newport str. SL254,75.3952 %Subject ←→ Query39.4334
NC_012962:1661683Photorhabdus asymbiotica, complete genome75.239 %Subject ←→ Query40.4188
NC_011094:3853036Salmonella enterica subsp. enterica serovar Schwarzengrund str75.1532 %Subject ←→ Query40.4943
NC_020064:3998715*Serratia marcescens FGI94, complete genome75.6955 %Subject ← Query49.6448
NC_014541:1165991Ferrimonas balearica DSM 9799 chromosome, complete genome75.7659 %Subject ← Query51.4043