Pre_GI: BLASTN Hits

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Query: NC_014323:4619344 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4619344, End: 4652417, Length: 33074

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014323:81602781602784169625670Herbaspirillum seropedicae SmR1 chromosome, complete genome01239BLASTN svgBLASTP svg
NC_015856:764651*76465179679232142Collimonas fungivorans Ter331 chromosome, complete genome0991BLASTN svgBLASTP svg
NC_010002:61045006104500613350729008Delftia acidovorans SPH-1, complete genome0642BLASTN svgBLASTP svg
NC_015563:12409781240978126477223795Delftia sp. Cs1-4 chromosome, complete genome3e-176626BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome1e-166595BLASTN svgBLASTP svg
NC_006350:3710641*3710641373649425854Burkholderia pseudomallei K96243 chromosome 1, complete sequence2e-152547BLASTN svgBLASTP svg
NC_009074:3559211*3559211358478825578Burkholderia pseudomallei 668 chromosome I, complete sequence2e-150541BLASTN svgBLASTP svg
NC_010508:451184*45118447649825315Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence6e-150539BLASTN svgBLASTP svg
NC_008060:2913671*2913671294708933419Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence4e-148533BLASTN svgBLASTP svg
NC_008542:483761*48376151469930939Burkholderia cenocepacia HI2424 chromosome 1, complete sequence4e-148533BLASTN svgBLASTP svg
NC_010682:3313944*3313944336341949476Ralstonia pickettii 12J chromosome 1, complete sequence3e-142513BLASTN svgBLASTP svg
NC_012856:3000839*3000839302487724039Ralstonia pickettii 12D chromosome 1, complete genome1e-135492BLASTN svgBLASTP svg
NC_011992:77390577390579750923605Acidovorax ebreus TPSY, complete genome2e-125458BLASTN svgBLASTP svg
NC_015138:11430151143015116543022416Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-65258BLASTN svgBLASTP svg
NC_007510:40984340984345009940257Burkholderia sp. 383 chromosome 1, complete sequence1e-52216BLASTN svgBLASTP svg
NC_003296:941920*94192098880146882Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-48202BLASTN svgBLASTP svg
NC_008390:40731540731543675629442Burkholderia cepacia AMMD chromosome 1, complete sequence1e-43186BLASTN svgBLASTP svg
NC_018691:24107792410779243591125133Alcanivorax dieselolei B5 chromosome, complete genome4e-43184BLASTN svgBLASTP svg
NC_010804:32439632439635325628861Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-42182BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome6e-36161BLASTN svgBLASTP svg
NC_009434:1156834*1156834117518418351Pseudomonas stutzeri A1501, complete genome9e-35157BLASTN svgBLASTP svg
NC_015422:3513689*3513689356513551447Alicycliphilus denitrificans K601 chromosome, complete genome3e-34155BLASTN svgBLASTP svg
NC_015422:34933963493396351574822353Alicycliphilus denitrificans K601 chromosome, complete genome3e-34155BLASTN svgBLASTP svg
NC_014931:60316456031645605636324719Variovorax paradoxus EPS chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_015740:1017000*1017000104061723618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-30141BLASTN svgBLASTP svg
NC_012779:26198712619871264372223852Edwardsiella ictaluri 93-146, complete genome8e-29137BLASTN svgBLASTP svg
NC_021150:1258780*1258780127736818589Azotobacter vinelandii CA6, complete genome3e-28135BLASTN svgBLASTP svg
NC_012560:1260031*1260031129243132401Azotobacter vinelandii DJ, complete genome3e-28135BLASTN svgBLASTP svg
NC_010086:87172387172390117629454Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-23119BLASTN svgBLASTP svg
NC_010805:15767351576735160409927365Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-23119BLASTN svgBLASTP svg
NC_007511:17805001780500180270922210Burkholderia sp. 383 chromosome 2, complete sequence5e-21111BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome7e-20107BLASTN svgBLASTP svg
NC_007511:10940501094050112124627197Burkholderia sp. 383 chromosome 2, complete sequence1e-18103BLASTN svgBLASTP svg
NC_010002:42566514256651428631629666Delftia acidovorans SPH-1, complete genome1e-18103BLASTN svgBLASTP svg
NC_015563:33090973309097334276333667Delftia sp. Cs1-4 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_008313:69169269169271552323832Ralstonia eutropha H16 chromosome 1, complete sequence7e-1797.6BLASTN svgBLASTP svg
NC_010002:57523635752363577667524313Delftia acidovorans SPH-1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome4e-1591.7BLASTN svgBLASTP svg
CP002185:234719*23471925468519967Escherichia coli W, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011567:139598*13959816123721640Anoxybacillus flavithermus WK1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011567:2327870*2327870234959921730Anoxybacillus flavithermus WK1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011901:3072817*3072817309809925283Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-1489.7BLASTN svgBLASTP svg
NC_014355:18650031865003194366878666Candidatus Nitrospira defluvii, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010645:27890627890629929520390Bordetella avium 197N, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014306:67988867988870467824791Erwinia billingiae Eb661, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014972:847099*84709987930632208Desulfobulbus propionicus DSM 2032 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_020064:29218092921809295042328615Serratia marcescens FGI94, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013592:14245601424560145021625657Dickeya dadantii Ech586, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013421:11435001143500116948625987Pectobacterium wasabiae WPP163, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_012721:13954171395417142220626790Burkholderia glumae BGR1 chromosome 2, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003143:40068844006884402857921696Yersinia pestis CO92, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_006155:43028264302826432457921754Yersinia pseudotuberculosis IP 32953, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007435:19811641981164201096229799Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_007645:6013242*6013242603721023969Hahella chejuensis KCTC 2396, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010465:42909542909545249323399Yersinia pseudotuberculosis YPIII, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010634:42349324234932425567620745Yersinia pseudotuberculosis PB1/+, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014228:43313274331327435436923043Xenorhabdus nematophila ATCC 19061, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_010337:98974*9897412939030417Heliobacterium modesticaldum Ice1, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008593:37456*374566080623351Clostridium novyi NT, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_003318:183914*18391420826324350Brucella melitensis 16M chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_004311:1096649*1096649112015223504Brucella suis 1330 chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_006933:1051873*1051873107526423392Brucella abortus biovar 1 str. 9-941 chromosome II, complete1e-0973.8BLASTN svgBLASTP svg
NC_007624:1046500*1046500107179425295Brucella melitensis biovar Abortus 2308 chromosome II, complete1e-0973.8BLASTN svgBLASTP svg
NC_009049:80184*8018410775527572Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010104:1096081*1096081111959923519Brucella canis ATCC 23365 chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_010167:1085106*1085106110813423029Brucella suis ATCC 23445 chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_010740:1051000*1051000107626825269Brucella abortus S19 chromosome 2, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_010814:155834*15583418064324810Geobacter lovleyi SZ, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013118:1109610*1109610113309923490Brucella microti CCM 4915 chromosome 2, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015858:1150446*1150446117370523260Brucella pinnipedialis B2/94 chromosome chromosome 2, complete1e-0973.8BLASTN svgBLASTP svg
NC_006351:14278814278817240329616Burkholderia pseudomallei K96243 chromosome 2, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_009078:142794*14279417264129848Burkholderia pseudomallei 1106a chromosome II, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_010505:1581429*1581429160710125673Methylobacterium radiotolerans JCM 2831, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013131:7401253*7401253742304021788Catenulispora acidiphila DSM 44928, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_002678:37015003701500374659945100Mesorhizobium loti MAFF303099, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_002937:1548081*1548081157450726427Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete2e-0869.9BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0869.9BLASTN svgBLASTP svg
NC_014219:83888*8388810707623189Bacillus selenitireducens MLS10 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015663:41296854129685415207222388Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015859:15897071589707160923119525Corynebacterium variabile DSM 44702 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete6e-0867.9BLASTN svgBLASTP svg
NC_013440:5509790*5509790553637126582Haliangium ochraceum DSM 14365, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019673:359540*35954038271523176Saccharothrix espanaensis DSM 44229 complete genome6e-0867.9BLASTN svgBLASTP svg
NC_020453:7409402*7409402743330123900Agromonas oligotrophica S58 DNA, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_003143:1059580*1059580109467535096Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003911:3453764*3453764347948625723Silicibacter pomeroyi DSS-3, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:3689000*3689000372277733778Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004193:241480*24148026554624067Oceanobacillus iheyensis HTE831, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:3156247*3156247318179425548Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005810:39172543917254395265235399Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008149:3556999*3556999359064933651Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008150:31790331790335159933697Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:17246917246919591323445Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:89392189392191618522265Yersinia pseudotuberculosis YPIII, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014219:2931796*2931796295390522110Bacillus selenitireducens MLS10 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015731:3274739*3274739330258727849Nitrosomonas sp. Is79A3 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008767:804655*80465582578721133Neisseria meningitidis FAM18, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008563:31192843119284314330124018Escherichia coli APEC O1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_004193:79588*7958811154731960Oceanobacillus iheyensis HTE831, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_003454:249304*24930426978820485Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete1e-0663.9BLASTN svgBLASTP svg
NC_003116:1018813*1018813104163622824Neisseria meningitidis Z2491, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012121:139741*13974118060640866Staphylococcus carnosus subsp. carnosus TM300, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012121:1444633*1444633146884124209Staphylococcus carnosus subsp. carnosus TM300, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_019897:3025871*3025871304870622836Thermobacillus composti KWC4 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-0663.9BLASTN svgBLASTP svg
NC_015672:470000*47000049397723978Flexistipes sinusarabici DSM 4947 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013192:469771*46977149651726747Leptotrichia buccalis DSM 1135, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012721:18296518296520829525331Burkholderia glumae BGR1 chromosome 2, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_002755:1095105*1095105111578720683Mycobacterium tuberculosis CDC1551, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002945:1095337*1095337111759922263Mycobacterium bovis AF2122/97, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008769:1125567*1125567114763722071Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009525:1096386*1096386111845622071Mycobacterium tuberculosis H37Ra, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009565:1098847*1098847112029321447Mycobacterium tuberculosis F11, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009720:2143124*2143124216762924506Xanthobacter autotrophicus Py2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012207:1097228*1097228111789920672Mycobacterium bovis BCG str. Tokyo 172, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014541:41679164167916419249724582Ferrimonas balearica DSM 9799 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014915:3039639*3039639305859918961Geobacillus sp. Y412MC52 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015848:1105892*1105892112732621435Mycobacterium canettii CIPT 140010059, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020210:2969862*2969862300083330972Geobacillus sp. GHH01, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_000962:1095078*1095078111574920672Mycobacterium tuberculosis H37Rv, complete genome4e-0661.9BLASTN svgBLASTP svg