Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4550529 Kineococcus radiotolerans SRS30216, complete genome

Start: 4550529, End: 4550846, Length: 318

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017955:693303:705492705492705809318Modestobacter marinus, complete genometransposase2e-30130
NC_017955:4075804:408430040843004084617318Modestobacter marinus, complete genometransposase2e-30130
NC_017955:3731480:384251338425133842830318Modestobacter marinus, complete genometransposase2e-30130
NC_015514:3307199:331180833118083312578771Cellulomonas fimi ATCC 484 chromosome, complete genometransposase IS3/IS911 family protein1e-24111
NC_013441:382597:411656411656411973318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein1e-23108
NC_013441:2842134:284319428431942843511318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein1e-23108
NC_013441:382597:412388412388412705318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein1e-23108
NC_013441:1221472:123143012314301231747318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein1e-23108
NC_013441:1221472:123735512373551237672318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein1e-23108
NC_013441:2842134:285491228549122855229318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein1e-23108
NC_013441:2761459:276638827663882766705318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein1e-23108
NC_015859:3346473:335224933522493352566318Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element4e-23106
NC_012520:1:311231123438327Rhodococcus opacus B4 plasmid pROB01, complete sequenceputative transposase orfA for insertion sequence element2e-22103
NC_018583:95388:100978100978101304327Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase IS3/IS911 family protein1e-21102
NC_018583:95388:132666132666132983318Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein1e-21101
NC_018583:95388:118572118572118889318Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein1e-21101
NC_013441:2761459:276540027654002765717318Gordonia bronchialis DSM 43247, complete genometransposase IS3/IS911 family protein2e-21100
NC_015671:1678088:168470616847061685113408Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein3e-21100
NC_014391:4617688:462619246261924626509318Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS3/IS911 family protein8e-2199
NC_013929:10109680:101232571012325710123583327Streptomyces scabiei 87.22 chromosome, complete genomeIS transposase3e-1580.5
NC_014814:2588628:259807925980792598405327Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase9e-1579
NC_000962:3781501:379603537960353796361327Mycobacterium tuberculosis H37Rv, complete genomePROBABLE TRANSPOSASE4e-1476.6
NC_009525:2635792:264759626475962647922327Mycobacterium tuberculosis H37Ra, complete genomeIS6110 hypothetical protein4e-1476.6
NC_002755:472872:484367484367484693327Mycobacterium tuberculosis CDC1551, complete genomeIS6110, hypothetical protein4e-1476.6
NC_000962:3116818:312150131215013121827327Mycobacterium tuberculosis H37Rv, complete genomePROBABLE TRANSPOSASE4e-1476.6
NC_009565:3485772:349219034921903492516327Mycobacterium tuberculosis F11, complete genometransposase4e-1476.6
NC_012207:3063039:306779530677953068121327Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transposase4e-1476.6
NC_009525:3794000:380515838051583805484327Mycobacterium tuberculosis H37Ra, complete genomeIS6110 hypothetical protein4e-1476.6
NC_008769:3070266:307502230750223075348327Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transposase4e-1476.6
NC_002945:3073370:307798130779813078307327Mycobacterium bovis AF2122/97, complete genometransposase4e-1476.6
NC_002755:3110929:311629031162903116616327Mycobacterium tuberculosis CDC1551, complete genomeIS6110, hypothetical protein4e-1476.6
NC_009565:3128094:313345631334563133782327Mycobacterium tuberculosis F11, complete genometransposase4e-1476.6
NC_017026:3754000:376528737652873765613327Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative transposase4e-1476.6
NC_017026:3110155:311534131153413115667327Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative transposase4e-1476.6
NC_016804:3049631:305438730543873054713327Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transposase4e-1476.6
NC_016768:1769332:178105517810551781381327Mycobacterium tuberculosis KZN 4207 chromosome, complete genometransposase4e-1476.6
NC_016768:1279178:129184812918481292174327Mycobacterium tuberculosis KZN 4207 chromosome, complete genometransposase4e-1476.6
NC_012943:1769445:178116817811681781494327Mycobacterium tuberculosis KZN 1435 chromosome, complete genometransposase4e-1476.6
NC_012943:1279228:129190412919041292230327Mycobacterium tuberculosis KZN 1435 chromosome, complete genometransposase4e-1476.6
NC_009525:3128786:313346931334693133795327Mycobacterium tuberculosis H37Ra, complete genomeIS6110 hypothetical protein4e-1476.6
NC_008699:56500:713447134471673330Nocardioides sp. JS614, complete genometransposase IS3/IS911 family protein9e-1475.5
NC_013169:2581500:258829025882902588610321Kytococcus sedentarius DSM 20547, complete genomeTransposase8e-1372.4
NC_015656:1947810:195623419562341956611378Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein1e-1271.6
NC_016887:3160000:317455331745533174870318Nocardia cyriacigeorgica GUH-2, complete genometransposase2e-1271.2
NC_004369:256262:286584286584286895312Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-1270.9
NC_013856:169974:174927174927175256330Azospirillum sp. B510 plasmid pAB510b, complete sequencetransposase7e-1269.3
NC_013235:3812838:383005538300553830381327Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein9e-1268.9
NC_016585:1004000:101414310141431014472330Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencetransposase of ISAli4, IS3 family subgroup IS51. ORFA1e-1168.2
NC_009077:1687304:171686017168601717123264Mycobacterium sp. JLS, complete genome6e-1166.2
NC_004369:1525787:153521215352121535523312Corynebacterium efficiens YS-314, complete genomeinsertion element conserved hypothetical protein7e-1165.9
NC_004369:1268956:129000012900001290311312Corynebacterium efficiens YS-314, complete genomeinsertion element conserved hypothetical protein7e-1165.9
NC_014391:1967167:200816820081682008479312Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS3/IS911 family protein7e-1165.9
NC_014391:277555:289971289971290282312Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS3/IS911 family protein7e-1165.9
NC_014391:2579919:260330726033072603618312Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS3/IS911 family protein7e-1165.9
NC_014391:4617688:462548646254864625797312Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS3/IS911 family protein7e-1165.9
NC_014815:841484:865614865614865922309Micromonospora sp. L5 chromosome, complete genometransposase is3/is911 family protein9e-1165.5
NC_013235:1325975:134576913457691346095327Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein1e-1065.1
NC_013235:1325975:134347013434701343796327Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein1e-1065.1
NC_015957:115133:129157129157129465309Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS3/IS911 family protein1e-1065.1
NC_015957:7408466:744986274498627450170309Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1065.1
NC_015957:7348269:735534873553487355656309Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1065.1
NC_015957:8845274:886383988638398864147309Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS3/IS911 family protein1e-1065.1
NC_019673:6362458:636809963680996368410312Saccharothrix espanaensis DSM 44229 complete genomeTransposase5e-1063.2
NC_015976:2406036:241942624194262419752327Sphingobium sp. SYK-6, complete genomeputative transposase for insertion sequence element7e-1062.8
NC_015976:3118804:312519731251973125523327Sphingobium sp. SYK-6, complete genomeputative transposase for insertion sequence element7e-1062.8
NC_006087:1334500:135038613503861351030645Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase6e-1062.8
NC_014151:3611956:364842736484273648705279Cellulomonas flavigena DSM 20109 chromosome, complete genometransposase IS3/IS911 family protein9e-1062.4
NC_008752:3217695:322509532250953225418324Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase IS3/IS911 family protein1e-0962
NC_009142:5698100:570781557078155708126312Saccharopolyspora erythraea NRRL 2338, complete genomeIS3 family transposase1e-0962
NC_014814:4235477:428287942828794283148270Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase1e-0961.6
NC_016111:1484424:149079014907901491101312Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-0960.8
NC_016111:2651500:266465026646502664961312Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-0960.8
NC_016111:3308310:332615633261563326467312Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-0960.8
NC_015422:4508028:451448945144894514812324Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein4e-0960.5
NC_015422:1:868286829005324Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein4e-0960.5
NC_015422:2858228:288667228866722886995324Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein4e-0960.5
NC_015422:3184823:319183631918363192159324Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein4e-0960.5
NC_015422:2806832:281552728155272815850324Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein4e-0960.5
NC_015422:910292:927516927516927839324Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein4e-0960.5
NC_015422:1643000:165139616513961651719324Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein4e-0960.5
NC_015957:5182460:519624151962415196810570Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS3/IS911 family protein3e-0960.5
NC_008687:965152:979812979812980135324Paracoccus denitrificans PD1222 chromosome 2, complete sequencetransposase IS3/IS911 family protein5e-0960.1
NC_014910:1200605:121205012120501212373324Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein4e-0960.1
NC_014910:1591003:160388516038851604208324Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein4e-0960.1
NC_014910:1501952:151134315113431511666324Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein4e-0960.1
NC_014910:966761:979991979991980314324Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein4e-0960.1
NC_014910:755192:764416764416764739324Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein4e-0960.1
NC_014910:1912552:193214919321491932472324Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein4e-0960.1
NC_019673:6394319:639788663978866398197312Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0960.1
NC_019673:3582004:359150935915093592075567Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-0959.7
NC_015740:141910:143918143918144241324Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein7e-0959.3
NC_015740:2614317:262962126296212629944324Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein7e-0959.3
NC_014814:5422972:544875354487535449064312Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase1e-0858.9
NC_014814:4235477:425568742556874255998312Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase1e-0858.9
NC_014814:4235477:426249642624964262807312Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase1e-0858.9
NC_010172:3894652:392568239256823926008327Methylobacterium extorquens PA1, complete genometransposase IS3/IS911 family protein2e-0858.2
NC_018691:359695:373805373805374128324Alcanivorax dieselolei B5 chromosome, complete genomeTransposase IS3/IS911 family protein2e-0857.8
NC_015731:1381737:139730413973041397624321Nitrosomonas sp. Is79A3 chromosome, complete genometransposase IS3/IS911 family protein2e-0857.8
NC_020908:2571943:259150925915092591841333Octadecabacter arcticus 238, complete genomehypothetical protein3e-0857
NC_014814:4326500:433460443346044334915312Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase4e-0856.6
NC_010511:7400255:740811974081197408445327Methylobacterium sp. 4-46 chromosome, complete genometransposase IS3/IS911 family protein5e-0856.6
NC_010511:5169338:517828351782835178609327Methylobacterium sp. 4-46 chromosome, complete genometransposase IS3/IS911 family protein6e-0856.2
NC_008577:2511326:251362725136272513866240Shewanella sp. ANA-3 chromosome 1, complete sequencetransposase9e-0855.8
NC_008314:1955793:196702519670251967336312Ralstonia eutropha H16 chromosome 2, complete sequenceTransposase IS4018e-0855.8
NC_009077:2308634:232021023202102320479270Mycobacterium sp. JLS, complete genometransposase IS3/IS911 family protein7e-0855.8
NC_002944:2373873:238750223875022387813312Mycobacterium avium subsp. paratuberculosis K-10, complete genomeIS61101e-0755.5
NC_011958:735755:779433779433779756324Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTransposase IS3/IS911 family protein2e-0755.1
NC_011958:1121387:113585711358571136180324Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTransposase IS3/IS911 family protein2e-0755.1
NC_011958:735755:771766771766772089324Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTransposase IS3/IS911 family protein1e-0755.1
NC_011963:1482042:149041414904141490737324Rhodobacter sphaeroides KD131 chromosome 1, complete sequencetransposase IS3/IS911 family protein1e-0755.1
NC_011958:53426:656496564965972324Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTransposase IS3/IS911 family protein1e-0755.1
NC_013235:1354443:136175613617561362091336Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein1e-0755.1
NC_013722:1425588:143069914306991431022324Xanthomonas albilineans, complete genomeputative isxal1 transposase orf a protein1e-0755.1
NC_013722:1905655:191708719170871917410324Xanthomonas albilineans, complete genomeputative isxal1 transposase orf a protein1e-0755.1
NC_013722:1689125:169820316982031698526324Xanthomonas albilineans, complete genomeputative isxal1 transposase orf a protein1e-0755.1
NC_013722:3117442:311835031183503118673324Xanthomonas albilineans, complete genomeputative isxal1 transposase orf a protein1e-0755.1
NC_013722:2810721:282843328284332828756324Xanthomonas albilineans, complete genomeputative isxal1 transposase orf a protein1e-0755.1
NC_014153:2044500:205004020500402050363324Thiomonas intermedia K12 chromosome, complete genometransposase IS3/IS911 family protein1e-0755.1
NC_007274:72979:780737807378396324Pseudomonas syringae pv. phaseolicola 1448A large plasmid, completeISPsy21, transposase orfA2e-0754.3
NC_008146:1016446:102372710237271024110384Mycobacterium sp. MCS, complete genometransposase IS3/IS9112e-0754.3
NC_008705:1022252:102953310295331029916384Mycobacterium sp. KMS, complete genometranscriptional regulator, Fis family2e-0754.3
NC_008686:1592073:159913715991371599460324Paracoccus denitrificans PD1222 chromosome 1, complete sequencetransposase IS3/IS911 family protein2e-0754.3
NC_008705:1557711:159583215958321596176345Mycobacterium sp. KMS, complete genometranscriptional regulator, Fis family2e-0754.3
NC_008146:2744612:275078327507832751127345Mycobacterium sp. MCS, complete genometransposase IS3/IS9112e-0754.3
NC_008705:2763131:276867127686712769015345Mycobacterium sp. KMS, complete genometranscriptional regulator, Fis family2e-0754.3
NC_014246:876000:887351887351887545195Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein4e-0753.5
NC_011958:976500:978988978988979935948Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein4e-0753.5
NC_016948:2033311:204025020402502040573324Mycobacterium intracellulare MOTT-64 chromosome, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_016948:3724390:373205337320533732376324Mycobacterium intracellulare MOTT-64 chromosome, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_016948:419500:429743429743430066324Mycobacterium intracellulare MOTT-64 chromosome, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_010170:1152131:117096811709681171306339Bordetella petrii, complete genometransposase IS911 HTH and LZ region5e-0753.1
NC_011206:1379068:138369313836931384022330Acidithiobacillus ferrooxidans ATCC 53993, complete genometransposase IS3/IS911 family protein5e-0753.1
NC_014550:3316115:334420433442043344515312Arthrobacter arilaitensis Re117, complete genome6e-0752.8
NC_014830:3870000:387597238759723876301330Intrasporangium calvum DSM 43043 chromosome, complete genometransposase IS3/IS911 family protein6e-0752.8
NC_008595:5168941:518545551854555185799345Mycobacterium avium 104, complete genomeISAfe7, transposase OrfA9e-0752.4
NC_008595:1413354:142263914226391422983345Mycobacterium avium 104, complete genomeISAfe7, transposase OrfA9e-0752.4
NC_008595:1869284:188065018806501880994345Mycobacterium avium 104, complete genomeISAfe7, transposase OrfA9e-0752.4
NC_008595:2252830:226708622670862267430345Mycobacterium avium 104, complete genomeISAfe7, transposase OrfA9e-0752.4
NC_010682:1:118171181712146330Ralstonia pickettii 12J chromosome 1, complete sequencetransposase IS3/IS911 family protein1e-0652
NC_010682:1913941:191877319187731919102330Ralstonia pickettii 12J chromosome 1, complete sequencetransposase IS3/IS911 family protein1e-0652
NC_012856:737170:771705771705772034330Ralstonia pickettii 12D chromosome 1, complete genometransposase IS3/IS911 family protein1e-0652
NC_007974:2097334:214094221409422141280339Ralstonia metallidurans CH34 chromosome 2, complete sequencetransposase IS3/IS9111e-0652
NC_007164:1434305:146329614632961463613318Corynebacterium jeikeium K411, complete genometransposase for IS35212e-0651.2
NC_010168:1373337:137501713750171375382366Renibacterium salmoninarum ATCC 33209 chromosome, complete genomeIS9942e-0651.2
NC_011963:1482042:149455114945511494841291Rhodobacter sphaeroides KD131 chromosome 1, complete sequencetransposase IS3/IS911 family protein3e-0650.8
NC_010623:1961685:203820920382092038535327Burkholderia phymatum STM815 chromosome 2, complete sequencetransposase IS3/IS911 family protein3e-0650.8
NC_013530:3204825:321877432187743219103330Xylanimonas cellulosilytica DSM 15894, complete genometransposase IS3/IS911 family protein3e-0650.4
NC_014118:2369669:237682023768202377146327Burkholderia sp. CCGE1002 chromosome chromosome 2, completetransposase IS3/IS911 family protein3e-0650.4
NC_003155:365500:372788372788373066279Streptomyces avermitilis MA-4680, complete genomeIS3 family transposase5e-0650.1
NC_008726:6335961:637044363704436370787345Mycobacterium vanbaalenii PYR-1, complete genometransposase IS3/IS911 family protein4e-0650.1
NC_015381:1623587:165776616577661658092327Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS9116e-0649.7
NC_014814:4235477:425414242541424254453312Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein7e-0649.3
NC_015859:3346473:3358735335873533599551221Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element7e-0649.3
NC_014666:5449884:546694854669485467289342Frankia sp. EuI1c chromosome, complete genometransposase IS3/IS911 family protein8e-0649.3