Pre_GI Gene

Some Help

Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:10109680 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10109680101108641185monooxygenase P450QuickGO ontologyBLASTP
1011090610111103198ferredoxinQuickGO ontologyBLASTP
10111100101122571158ferredoxin reductaseQuickGO ontologyBLASTP
1011273210113073342PadR family transcriptional regulatorQuickGO ontologyBLASTP
1011307010114026957hypothetical protein
1011412510115024900hypothetical protein
1011513210115659528hypothetical proteinBLASTP
1011586910116867999hypothetical proteinBLASTP
1011714610118090945hypothetical proteinBLASTP
1011815710118276120hypothetical protein
1011843110118652222hypothetical protein
1011893210119573642hypothetical protein
1012015410120762609hypothetical proteinBLASTP
1012068010121675996IS transposaseQuickGO ontologyBLASTP
1012172910122592864LysR family transcriptional regulatorQuickGO ontologyBLASTP
1012325710123583327IS transposaseQuickGO ontologyBLASTP
1012382910124509681integrase componentQuickGO ontologyBLASTP
1012456910124949381hypothetical proteinBLASTP
10125758101273621605hypothetical protein
1012755710128072516hypothetical protein