Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:5182460 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5182460519373011271amino acid adenylation domain-containing proteinQuickGO ontologyBLASTP
519372751950701344hypothetical protein
51951105195661552BLASTP
51958285196202375hypothetical proteinBLASTP
51962415196810570transposase IS3IS911 family proteinQuickGO ontologyBLASTP
51970335197869837helicase A859LQuickGO ontology
519821851997831566integrase catalytic subunitQuickGO ontologyBLASTP
51998585200697840IstB domain-containing protein ATP-binding proteinQuickGO ontologyBLASTP
52007095201113405hypothetical proteinBLASTP
52013135201807495BLASTP
52018855202244360transposase IS4 family proteinQuickGO ontologyBLASTP
52023415203216876hypothetical protein
52039035204268366hypothetical protein
52044975204853357hypothetical protein
52048675205493627hypothetical protein
52057265206406681hypothetical protein
52064035206732330putative recombinaseQuickGO ontology
52067645207273510BLASTP
52072705207758489hypothetical proteinBLASTP
52078455207988144BLASTP
520827852107552478helicase-associatedQuickGO ontologyBLASTP
52126295212739111hypothetical proteinBLASTP
521283452142731440peptidase C14 caspase catalytic subunit p20QuickGO ontologyBLASTP
52142735214656384hypothetical proteinBLASTP
521511552161941080integrase family proteinQuickGO ontologyBLASTP
52161915216520330XRE family transcriptional regulatorQuickGO ontologyBLASTP
521651752176801164hypothetical proteinBLASTP
52176935217839147hypothetical proteinBLASTP
522023252212841053fatty acid desaturaseQuickGO ontologyBLASTP