Pre_GI Gene

Some Help

Host: NC_011958 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011958:53426 Rhodobacter sphaeroides KD131 chromosome 2, complete genome

Host Lineage: Rhodobacter sphaeroides; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to grow using photosynthesis, chemosynthesis, and usually can grow under both anaerobic and aerobic conditions. The most extensively studied bacteria with regards to its photosynthetic capabilities which includes the structure, function and regulation of its photosynthetic membranes, its mechanisms of CO2 and nitrogen fixation, cytochrome diversity and its electron transport systems. It can grow aerobically and anaerobically in the light and anaerobically in the dark. It produces an intracytoplasmic membrane system consisting of membrane invaginations where the light harvesting complexes (LH1 and LH2) and the reaction center are synthesized. Furthermore, it has the ability to detoxify metal oxides and oxyanions and hence has a role in bioremediation.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5342653680255hypothetical proteinBLASTP
5381953968150hypothetical proteinBLASTP
5429655081786Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
5513855563426hypothetical proteinBLASTP
5557055929360hypothetical proteinBLASTP
5608456380297hypothetical proteinBLASTP
56377580291653Amidohydrolase 3QuickGO ontologyBLASTP
5854159995145516S Ribosomal RNAQuickGO ontologyBLASTP
602216029777tRNA-IleQuickGO ontology
604016047676tRNA-AlaQuickGO ontologyBLASTP
6081163728291823S Ribosomal RNAQuickGO ontologyBLASTP
63830639431145S Ribosomal RNAQuickGO ontologyBLASTP
639886406477tRNA-MetQuickGO ontology
6423764926690hypothetical proteinBLASTP
6564965972324Transposase IS3IS911 family proteinQuickGO ontologyBLASTP
6596966877909Integrase catalytic regionQuickGO ontologyBLASTP
673836863312515-aminolevulinate synthase 2QuickGO ontologyBLASTP
68912704201509Protein rdxAQuickGO ontologyBLASTP
70548719181371hypothetical proteinBLASTP
7200872553546hypothetical proteinBLASTP
73088733332463-oxoacyl-Acyl-carrier-protein reductaseQuickGO ontologyBLASTP
7340773706300Transposase IS3IS911 family proteinQuickGO ontologyBLASTP
7375774164408hypothetical proteinBLASTP
7421774939723Transposase IS3IS911 family proteinQuickGO ontologyBLASTP
7518175624444Transposase IS4 familyQuickGO ontologyBLASTP
7571176091381Transposase IS4 familyQuickGO ontologyBLASTP