Pre_GI: BLASTP Hits

Some Help

Query: NC_009012:2927793:2934086 Clostridium thermocellum ATCC 27405, complete genome

Start: 2934086, End: 2934514, Length: 429

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014538:2158131:218091821809182181331414Thermoanaerobacter sp. X513 chromosome, complete genomehelix-turn-helix domain-containing protein9e-1785.5
NC_015573:2463123:248983824898382490296459Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1579.3
NC_014964:2272413:229248922924892292878390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein1e-1375.1
NC_014650:603500:617995617995618441447Geobacillus sp. Y4.1MC1 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1270.9
NC_013921:1915377:192814219281421928690549Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, XRE family3e-1270.5
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1270.1
NC_014831:8965:177711777118166396Thermaerobacter marianensis DSM 12885 chromosome, complete genomehelix-turn-helix domain protein5e-1269.7
NC_014551:576000:577723577723578103381Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein6e-1269.3
NC_015519:1081539:108566910856691086064396Tepidanaerobacter sp. Re1 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1168.6
NC_021182:2536000:253788925378892538323435Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator5e-1166.6
NC_014657:2127500:214037221403722140905534Caldicellulosiruptor owensensis OL chromosome, complete genomehelix-turn-helix domain protein5e-1166.6
NC_011660:2924397:292631729263172926793477Listeria monocytogenes HCC23 chromosome, complete genomegp334e-1166.6
NC_017167:2298962:237640023764002376648249Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1XRE family transcriptional regulator5e-1166.2
NC_011837:3272752:329170232917023292304603Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1166.2
NC_009706:3341250:336020033602003360802603Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator6e-1166.2
NC_014376:2964731:299013029901302990552423Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, XRE family7e-1165.9
NC_015660:1076159:108793410879341088275342Geobacillus thermoglucosidasius C56-YS93 chromosome, completehelix-turn-helix domain-containing protein7e-1165.9
NC_018870:757416:801826801826802275450Thermacetogenium phaeum DSM 12270 chromosome, complete genomehypothetical protein1e-1065.1
NC_013198:1095591:110846011084601108798339Lactobacillus rhamnosus GG, complete genomeprophage protein, DNA-binding protein2e-1064.7
NC_016894:3988180:400563340056334006028396Acetobacterium woodii DSM 1030 chromosome, complete genomeputative phage repressor2e-1064.3
NC_003212:57061:785057850578981477Listeria innocua Clip11262, complete genomehypothetical protein2e-1064.3
NC_009012:1857845:1863582186358218647061125Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family3e-1063.9
NC_016791:3891272:391212439121243912540417Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator3e-1063.9
NC_015913:117966:118288118288118545258Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein3e-1063.9
NC_020272:2692746:269463426946342694972339Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator3e-1063.9
NC_012034:2555447:257988525798852580199315Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, XRE family3e-1063.5
NC_009253:3017280:302629030262903026709420Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator3e-1063.5
NC_009617:1897887:190150219015021901873372Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1063.5
NC_011830:720756:738182738182738397216Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, XRE family6e-1062.8
NC_007907:808893:840301840301840516216Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-1062.8
NC_020995:3300751:330534333053433305561219Enterococcus casseliflavus EC20, complete genomehypothetical protein8e-1062.4
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator9e-1062.4
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein9e-1062.4
NC_000964:2146000:222025722202572220583327Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0961.6
NC_015573:2463123:248662424866242486842219Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0961.2
NC_015573:2040500:204189420418942042295402Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0960.8
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein3e-0960.5
NC_002570:367000:370443370443370793351Bacillus halodurans C-125, complete genometranscriptional regulator (phage-related)3e-0960.5
NC_012962:1068102:108946510894651089866402Photorhabdus asymbiotica, complete genomeputative phage regulator3e-0960.5
NC_012962:1068102:109723810972381097639402Photorhabdus asymbiotica, complete genomeputative phage regulator3e-0960.5
NC_016641:2735054:274161127416112741856246Paenibacillus terrae HPL-003 chromosome, complete genomeXRE family transcriptional regulator3e-0960.5
NC_016641:2735054:274219227421922742404213Paenibacillus terrae HPL-003 chromosome, complete genomeXRE family transcriptional regulator4e-0960.1
NC_016052:842762:846086846086846415330Tetragenococcus halophilus NBRC 12172, complete genomeputative Xre family DNA-binding protein4e-0960.1
NC_009456:557962:561184561184561519336Vibrio cholerae O395 chromosome 1, complete sequencecryptic phage CTXphi transcriptional repressor RstR6e-0959.7
NC_012583:683887:702423702423702758336Vibrio cholerae O395 chromosome chromosome II, complete sequencecryptic phage CTXphi transcriptional repressor RstR, classical6e-0959.7
NC_012667:839318:858206858206858550345Vibrio cholerae MJ-1236 chromosome 2, complete genomecryptic phage CTXphi transcriptional repressor RstR6e-0959.7
NC_013385:90331:106210106210106566357Ammonifex degensii KC4, complete genometranscriptional regulator, XRE family5e-0959.7
NC_021184:3533500:353518535351853535601417Desulfotomaculum gibsoniae DSM 7213, complete genomeputative transcriptional regulator5e-0959.7
NC_017068:2827568:284872528487252849108384Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative Xre family transcriptional regulator5e-0959.7
NC_020995:3300751:330563933056393305863225Enterococcus casseliflavus EC20, complete genomehypothetical protein7e-0959.3
NC_014976:684000:685892685892686242351Bacillus subtilis BSn5 chromosome, complete genomeputative Xre family transcriptional regulator7e-0959.3
NC_016048:3063888:309691430969143097129216Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein1e-0858.5
NC_013205:526281:535213535213535704492Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family2e-0858.2
NC_017199:31500:355233552335900378Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28,putative transcriptional regulator2e-0858.2
NC_003212:1248000:124920512492051249633429Listeria innocua Clip11262, complete genomehypothetical protein1e-0858.2
NC_013766:679906:683546683546683872327Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator2e-0857.4
NC_014759:4133809:415013541501354150905771Marivirga tractuosa DSM 4126 chromosome, complete genomehelix-turn-helix domain protein4e-0857
NC_010001:649000:650678650678651022345Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family4e-0857
NC_009253:529494:536731536731537033303Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator3e-0857
NC_016048:1930089:194775419477541948359606Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein3e-0857
NC_012778:403962:424154424154424807654Eubacterium eligens ATCC 27750, complete genomehypothetical protein3e-0857
NC_003997:1007139:101333710133371013558222Bacillus anthracis str. Ames, complete genomeDNA-binding protein4e-0856.6
NC_013853:2048867:206514420651442065569426Streptococcus mitis B6, complete genometranscriptional regulator5e-0856.6
NC_010516:2328288:234697823469782347427450Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator5e-0856.6
NC_010610:755000:763466763466763780315Lactobacillus fermentum IFO 3956, complete genomehypothetical protein5e-0856.6
NC_003212:2413824:244192224419222442404483Listeria innocua Clip11262, complete genomehypothetical protein5e-0856.6
NC_015601:627217:628845628845629261417Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeXRE family transcriptional regulator7e-0856.2
NC_016935:7512884:752068375206837520877195Paenibacillus mucilaginosus 3016 chromosome, complete genomeXRE family transcriptional regulator7e-0855.8
NC_015690:7422911:743071274307127430906195Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXRE family transcriptional regulator7e-0855.8
NC_017179:1683199:168775916877591688100342Clostridium difficile BI1, complete genomephage repressor8e-0855.8
NC_015913:117966:119554119554119772219Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeXRE family transcriptional regulator9e-0855.8
NC_018867:1996154:201127420112742011486213Dehalobacter sp. CF chromosome, complete genometranscriptional regulator, XRE family9e-0855.8
NC_018866:1966373:198149319814931981705213Dehalobacter sp. DCA chromosome, complete genometranscriptional regulator, XRE family9e-0855.8
NC_014334:2696000:271134127113412711898558Lactobacillus casei str. Zhang chromosome, complete genomeXRE family transcriptional regulator1e-0755.5
NC_015428:1483768:150354015035401503917378Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0755.5
NC_016048:751000:769269769269769643375Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein1e-0755.1
NC_005945:1008000:101323210132321013510279Bacillus anthracis str. Sterne, complete genomeDNA-binding protein1e-0755.1
NC_019896:1989997:200906620090662009404339Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetranscription regulator YobD1e-0755.1
NC_014828:501342:504784504784505005222Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelix-turn-helix domain protein2e-0755.1
NC_009633:2592000:263151726315172631879363Alkaliphilus metalliredigens QYMF chromosome, complete genomehelix-turn-helix domain-containing protein2e-0754.7
NC_006322:1415863:142614914261491426517369Bacillus licheniformis ATCC 14580, complete genomeYqaE2e-0754.7
NC_006270:1415001:142528614252861425654369Bacillus licheniformis ATCC 14580, complete genomeprobable transcriptional regulator (phage-related)2e-0754.7
NC_005140:883857:890172890172890684513Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-0754.7
NC_005140:883857:894533894533895045513Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-0754.7
NC_014206:3355156:337460433746043375011408Geobacillus sp. C56-T3 chromosome, complete genomeXRE family transcriptional regulator2e-0754.7
NC_014915:3320768:335612833561283356535408Geobacillus sp. Y412MC52 chromosome, complete genomehelix-turn-helix domain protein2e-0754.7
NC_013411:3314799:335015933501593350566408Geobacillus sp. Y412MC61, complete genometranscriptional regulator, XRE family2e-0754.7
NC_020210:3246839:326198032619803262387408Geobacillus sp. GHH01, complete genometranscriptional regulator2e-0754.7
NC_007530:1007140:101333810133381013787450Bacillus anthracis str. 'Ames Ancestor', complete genomedna-binding protein2e-0754.3
NC_012659:1008028:101323810132381013687450Bacillus anthracis str. A0248, complete genomehypothetical protein2e-0754.3
NC_000964:2049899:205548820554882055826339Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0754.3
NC_014828:1019533:103167510316751031896222Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelix-turn-helix domain protein2e-0754.3
NC_016779:991298:994401994401994850450Bacillus cereus F837/76 chromosome, complete genomeXRE family transcriptional regulator3e-0753.9
NC_009922:1917271:191727119172711917642372Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, XRE family3e-0753.9
NC_016791:2888319:289017028901702890790621Clostridium sp. BNL1100 chromosome, complete genomeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains3e-0753.9
NC_011772:1011220:101541510154151015864450Bacillus cereus G9842, complete genomehypothetical protein3e-0753.9
NC_011773:1050000:105554110555411055990450Bacillus cereus AH820 chromosome, complete genomehypothetical protein3e-0753.9
NC_010184:1017000:102191410219141022363450Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, XRE family3e-0753.9
NC_011898:2509267:251475425147542515374621Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family3e-0753.9
NC_010465:1790739:180572318057231806124402Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, XRE family3e-0753.5
NC_019904:4744744:475924747592474760014768Echinicola vietnamensis DSM 17526 chromosome, complete genometranscriptional regulator3e-0753.5
NC_015573:2463123:248569424856942485930237Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0753.5
NC_017208:1831918:183596118359611836299339Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional regulator6e-0753.1
NC_011725:1032500:103773410377341038183450Bacillus cereus B4264 chromosome, complete genomehypothetical protein5e-0753.1
NC_004722:1008500:101368010136801014129450Bacillus cereus ATCC 14579, complete genomeTranscriptional repressor5e-0753.1
NC_017195:2027430:204155520415552041794240Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein5e-0753.1
NC_016048:2907702:292277429227742922983210Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein5e-0753.1
NC_017294:115500:118873118873119088216Candidatus Arthromitus sp. SFB-mouse-Yit, complete genometranscriptional regulator7e-0752.8
NC_009513:870837:873129873129873464336Lactobacillus reuteri F275, complete genometranscriptional regulator, XRE family7e-0752.8
NC_007644:280000:289097289097289333237Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family9e-0752.4
NC_012925:1357783:137191913719191372440522Streptococcus suis P1/7, complete genomeDNA-binding phage protein9e-0752.4
NC_009442:1446508:146064514606451461166522Streptococcus suis 05ZYH33 chromosome, complete genometranscriptional regulator9e-0752.4
NC_009443:1445936:146006914600691460590522Streptococcus suis 98HAH33, complete genometranscriptional regulator9e-0752.4
NC_012924:1446190:146032714603271460848522Streptococcus suis SC84, complete genomeDNA-binding phage protein9e-0752.4
NC_012926:1496510:151066715106671511188522Streptococcus suis BM407 chromosome, complete genomeDNA-binding phage protein9e-0752.4
NC_014655:614874:623380623380624138759Leadbetterella byssophila DSM 17132 chromosome, complete genomehelix-turN-helix domain protein9e-0752.4
NC_014828:501342:501342501342502097756Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelix-turn-helix domain protein1e-0652
NC_005957:1037205:104193210419321042381450Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator; possible DNA-binding protein1e-0652
NC_009699:1698951:1710908171090817120201113Clostridium botulinum F str. Langeland chromosome, complete genomeDNA-binding protein1e-0652
NC_017297:1700000:1711041171104117121531113Clostridium botulinum F str. 230613 chromosome, complete genomeputative DNA-binding protein1e-0652
NC_015759:1117122:113230111323011133011711Weissella koreensis KACC 15510 chromosome, complete genometranscriptional regulator, Cro/CI family protein2e-0651.6
NC_004722:1804788:180713218071321807470339Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator2e-0651.2
NC_021175:2063611:207187220718722072216345Streptococcus oligofermentans AS 1.3089, complete genomeCro/CI family transcriptional regulator2e-0651.2
NC_012658:1658505:1670222167022216713341113Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative DNA-binding protein2e-0651.2
NC_017208:1050414:105646110564611056910450Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional repressor2e-0651.2
NC_015975:923812:941399941399941818420Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein3e-0650.4
NC_020156:1565500:158074715807471581502756Nonlabens dokdonensis DSW-6, complete genomeputative prophage LambdaCh01, repressor protein4e-0650.4
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)4e-0650.1
NC_012891:1277966:129143912914391292212774Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein4e-0650.1
NC_013132:4803460:482117648211764821439264Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family4e-0650.1
NC_009706:2003194:202021320202132020998786Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-0650.1
NC_011837:1935294:195171619517161952501786Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0650.1
NC_017179:1683199:168719916871991687747549Clostridium difficile BI1, complete genomephage regulatory protein4e-0650.1
NC_015875:190041:192949192949193464516Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeXRE family transcriptional regulator5e-0649.7
NC_013171:896802:898431898431899051621Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, XRE family6e-0649.7
NC_015144:900000:908808908808909149342Weeksella virosa DSM 16922 chromosome, complete genomehelix-turn-helix domain protein6e-0649.7
NC_013798:1778758:179057017905701790932363Streptococcus gallolyticus UCN34, complete genomeputative transcriptional regulator, Cro/CI family6e-0649.7
NC_010001:69000:909309093091751822Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family8e-0649.3
NC_020418:3022891:303662530366253036993369Morganella morganii subsp. morganii KT, complete genomehypothetical protein8e-0649.3
NC_004129:195347:205065205065205427363Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein, putative8e-0649.3
NC_007644:280000:304622304622305062441Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family6e-0649.3
NC_014624:1675500:174416317441631744366204Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein6e-0649.3
NC_016628:193000:211408211408211929522Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein9e-0648.9
NC_016628:193000:206717206717207238522Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein9e-0648.9
NC_016602:1994110:200348320034832004004522Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein9e-0648.9
NC_017025:1651870:166594816659481666286339Flavobacterium indicum GPTSA100-9, complete genometranscriptional regulator, XRE family1e-0548.9