Pre_GI Gene

Some Help

Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:649000 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
649202649936735hypothetical protein
650047650415369membrane proteinQuickGO ontologyBLASTP
650678651022345transcriptional regulator XRE familyQuickGO ontologyBLASTP
6512196526911473PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
6527066538121107response regulator receiver modulated metal dependent phosphohydrolaseQuickGO ontologyBLASTP
6540746555461473hypothetical proteinBLASTP
655666656220555RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
656236656652417hypothetical protein
656934657851918malonyl CoA-acyl carrier protein transacylaseQuickGO ontologyBLASTP
6579526586927413-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
65874465997912363-oxoacyl-acyl-carrier-protein synthase 2QuickGO ontologyBLASTP
660000660431432acetyl-CoA carboxylase biotin carboxyl carrier proteinQuickGO ontologyBLASTP
660574660999426beta-hydroxyacyl-acyl-carrier-protein dehydratase FabZQuickGO ontologyBLASTP
6610816624271347acetyl-CoA carboxylase biotin carboxylaseQuickGO ontologyBLASTP
662529663455927acetyl-CoA carboxylase carboxyl transferase beta subunitQuickGO ontologyBLASTP
663483664382900acetyl-CoA carboxylase carboxyl transferase alpha subunitQuickGO ontologyBLASTP
664806665345540RubrerythrinQuickGO ontologyBLASTP
6655526671201569two component transcriptional regulator AraC familyQuickGO ontologyBLASTP
6671176689011785histidine kinase internal regionQuickGO ontologyBLASTP