Pre_GI Gene

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Host: NC_016894 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016894:3988180 Acetobacterium woodii DSM 1030 chromosome, complete genome

Host Lineage: Acetobacterium woodii; Acetobacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Acetobacterium woodii is a Gram positive, motile, strict anaerobic, acetogenic bacterium, that relies on Na+ as coupling ion in bioenergetic reactions. The organism can use a wide range of substrates, such as sugars, alcohols, methoxylated aromatic acids or C1 compounds. Electrons derived from these electron donors are used in the Wood-Ljungdahl-pathway where the organism fixes CO2 and produces acetate. The pathway of CO2-fixation is coupled to energy conservation via a chemiosmotic mechanism, one enzyme that seems to be involved is the Rnf complex. The produced Na+ gradient can be used to drive ATP-synthesis or flagella rotation. The ATP synthase is a member of the F1FO class of enzymes and has an unusual hybrid rotor. Can use alternative electron acceptors like the lignin degradation product caffeate.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39877593988187429hypothetical proteinBLASTP
39881803988515336prophage pi2 proteinQuickGO ontologyBLASTP
39885163988818303putative prophage LambdaBa04 DNA packaging proteinQuickGO ontologyBLASTP
398886039900951236phage major capsid protein HK97 familyQuickGO ontologyBLASTP
39900883990861774ATP-dependent Clp protease proteolytic subunitQuickGO ontologyBLASTP
399086439919881125prophage LambdaBa04 portal proteinQuickGO ontologyBLASTP
399205039937051656prophage lambdaba04 terminase large subunitQuickGO ontologyBLASTP
39937023994085384hypothetical proteinBLASTP
39941883994634447hypothetical proteinBLASTP
39949213995178258hypothetical protein
39953903996004615prophage LambdaBa04 site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
39962663996604339hypothetical proteinBLASTP
39967803997607828phage-like N6 adenine-specific DNA methylaseQuickGO ontologyBLASTP
39977683998622855hypothetical proteinBLASTP
39991013999883783prophage LambdaBa01 C-5 cytosine-specific DNA methylase family proteinQuickGO ontologyBLASTP
40005174000702186hypothetical proteinBLASTP
40013404002158819bacteriophage-like proteinQuickGO ontologyBLASTP
40021554002385231hypothetical proteinBLASTP
40024434003147705phage-like proteinQuickGO ontologyBLASTP
40031444003473330replication terminator protein phage-like proteinQuickGO ontologyBLASTP
40037084004196489putative prophage LambdaCh01 transcriptional regulatorQuickGO ontologyBLASTP
40042564004621366hypothetical proteinBLASTP
40056334006028396putative phage repressorQuickGO ontologyBLASTP