Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:69000 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
69062703721311Peptidoglycan-binding LysMQuickGO ontologyBLASTP
70537717331197hypothetical proteinBLASTP
7173772438702hypothetical proteinBLASTP
72635735979632-dehydro-3-deoxyphosphogluconate aldolase4-hydroxy-2-oxoglutarate aldolaseQuickGO ontologyBLASTP
73980753171338hypothetical protein
7601977542152416S ribosomal RNAQuickGO ontologyBLASTP
77715778311175S ribosomal RNAQuickGO ontologyBLASTP
778387791174tRNA-IleQuickGO ontology
779677803973tRNA-AlaQuickGO ontologyBLASTP
7832781226290023S ribosomal RNAQuickGO ontologyBLASTP
812928136372tRNA-AsnQuickGO ontology
814108148071tRNA-CysQuickGO ontology
8199882324327hypothetical protein
8230582850546hypothetical protein
83519858552337aldehyde oxidase and xanthine dehydrogenase molybdopterin bindingQuickGO ontologyBLASTP
8584286678837molybdopterin dehydrogenase FAD-bindingQuickGO ontologyBLASTP
86662871354742Fe-2S-binding domain proteinQuickGO ontologyBLASTP
8744987607159hypothetical protein
8773988626888prolipoprotein diacylglyceryl transferaseQuickGO ontologyBLASTP
8912289832711PHP domain proteinQuickGO ontologyBLASTP
8991790717801transcriptional regulator XRE familyQuickGO ontologyBLASTP
9093091751822transcriptional regulator XRE familyQuickGO ontologyBLASTP