Pre_GI Gene

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Host: NC_015975 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015975:923812 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
923812924600789hypothetical protein
9246139261481536DipeptidaseQuickGO ontologyBLASTP
9262099263971894-oxalocrotonate tautomeraseQuickGO ontologyBLASTP
9264739277801308Diaminopimelate decarboxylaseQuickGO ontologyBLASTP
927814928116303hypothetical protein
928139928945807hydrolase HAD superfamilyQuickGO ontologyBLASTP
9295159314611947type III restriction-modification systemQuickGO ontologyBLASTP
9314639344592997type III restriction-modification system enzymeQuickGO ontologyBLASTP
9344439357351293hypothetical proteinBLASTP
9357169375991884SNF2 family helicaseQuickGO ontologyBLASTP
9378549393261473hypothetical proteinBLASTP
939607939939333transposaseQuickGO ontologyBLASTP
9399479411281182transposaseQuickGO ontologyBLASTP
941265941402138hypothetical protein
941399941818420hypothetical proteinBLASTP
941907942476570putative HNH endonuclease phage-like proteinQuickGO ontologyBLASTP
942617942757141hypothetical protein
942853943044192hypothetical protein
943186943557372hypothetical proteinBLASTP
943585944574990putative phage-associated proteinQuickGO ontologyBLASTP
944755945114360hypothetical proteinBLASTP
9451529462581107hypothetical proteinBLASTP