Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:2509267 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25105222510701180hypothetical proteinBLASTP
251082925123431515RecombinaseQuickGO ontologyBLASTP
25124472512845399Fascin family proteinQuickGO ontology
251290925147411833histidine kinaseQuickGO ontologyBLASTP
25147542515374621transcriptional regulator XRE familyQuickGO ontologyBLASTP
25157142516139426hypothetical proteinBLASTP
25161732516595423hypothetical proteinBLASTP
251698525180311047Integrase catalytic regionQuickGO ontologyBLASTP
25182582518551294hypothetical proteinBLASTP
251857925196251047Peptidoglycan-binding domain 1 proteinQuickGO ontologyBLASTP
252283425244861653YD repeat proteinQuickGO ontologyBLASTP
25253352526135801Integrase catalytic regionQuickGO ontologyBLASTP
25261772526755579transposase IS3IS911 family proteinQuickGO ontologyBLASTP
25268432527778936Alphabeta hydrolase fold-3 domain proteinQuickGO ontologyBLASTP
25278972528691795hypothetical proteinBLASTP
25287102529510801putative ABC-2 type transport system permease proteinQuickGO ontologyBLASTP
25295162530397882ABC transporter relatedQuickGO ontologyBLASTP
253084725321301284transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
25322322532846615transcriptional regulator TetR familyQuickGO ontologyBLASTP
253303325343431311lipolytic protein G-D-S-L familyQuickGO ontologyBLASTP