Pre_GI: BLASTP Hits

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Query: NC_004347:3028000:3028125 Shewanella oneidensis MR-1, complete genome

Start: 3028125, End: 3029150, Length: 1026

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015717:2479394:249971124997112500688978Hyphomicrobium sp. MC1, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III2e-23110
NC_011297:787932:798957798957799943987Dictyoglomus thermophilum H-6-12, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III3e-23109
NC_011661:961129:969801969801970787987Dictyoglomus turgidum DSM 6724, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III1e-21103
NC_016026:997225:998351998351999274924Micavibrio aeruginosavorus ARL-13 chromosome, complete genome3-oxoacyl-(acyl-carrier-) synthase III family protein3e-21103
NC_007925:2892371:290560929056092906586978Rhodopseudomonas palustris BisB18, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III4e-21102
NC_004463:5540924:556637955663795567359981Bradyrhizobium japonicum USDA 110, complete genome3-oxoacyl-(acyl carrier protein) synthase2e-20100
NC_015277:6213304:808880889077990Sphingobacterium sp. 21 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 33e-2099.8
NC_014774:605085:605085605085606056972Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete3-oxoacyl-(acyl carrier protein) synthase III4e-1995.9
NC_019903:2708500:272100427210042721999996Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,3-oxoacyl-(acyl-carrier-protein) synthase III5e-1995.5
NC_010723:1133163:113901711390171139985969Clostridium botulinum E3 str. Alaska E43, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III7e-1995.1
NC_012985:779279:780379780379781353975Candidatus Liberibacter asiaticus str. psy62, complete genome3-oxoacyl-(acyl carrier protein) synthase III1e-1894.4
NC_010674:1170264:117516311751631176131969Clostridium botulinum B str. Eklund 17B, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III3e-1892.8
NC_007498:1666242:168270416827041683687984Pelobacter carbinolicus DSM 2380, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III5e-1892
NC_015977:3011177:303586130358613036844984Roseburia hominis A2-183 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III1e-1790.9
NC_019978:1410041:142228514222851423280996Halobacteroides halobius DSM 5150, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III2e-1790.1
NC_011027:136954:149674149674150663990Chlorobaculum parvum NCIB 8327, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III3e-1789.7
NC_013798:345339:365909365909366883975Streptococcus gallolyticus UCN34, complete genomeputative 3-oxoacyl-[acyl-carrier-protein] synthase III2e-1687
NC_015425:34861:417764177642750975Clostridium botulinum BKT015925 chromosome, complete genome3-oxoacyl-ACP synthase4e-1685.9
NC_011830:4031901:405955840595584060553996Desulfitobacterium hafniense DCB-2, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III4e-1685.9
NC_016627:2723678:272367827236782724673996Clostridium clariflavum DSM 19732 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III5e-1685.5
NC_014483:1954856:1967630196763019686311002Paenibacillus polymyxa E681 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III)5e-1685.5
NC_014964:1309845:132105213210521322047996Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete3-oxoacyl-(acyl-carrier-protein) synthase III7e-1685.1
NC_007517:1792000:180010218001021801082981Geobacter metallireducens GS-15, complete genomeBeta-ketoacyl-acyl carrier protein synthase III (FabH)9e-1684.7
NC_014622:2114244:212704321270432128032990Paenibacillus polymyxa SC2 chromosome, complete genome3-oxoacyl-ACP synthase1e-1584
NC_015958:1422319:143287114328711433866996Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 32e-1583.6
NC_015185:875324:889559889559890500942Desulfurobacterium thermolithotrophum DSM 11699 chromosome,3-oxoacyl-(acyl-carrier-protein) synthase 33e-1583.2
NC_004663:107019:1116481116481126551008Bacteroides thetaiotaomicron VPI-5482, complete genome3-oxoacyl-(acyl carrier protein) synthase4e-1582.4
NC_018664:1699618:171361917136191714611993Clostridium acidurici 9a chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III6e-1581.6
NC_007484:1823751:186011018601101861102993Nitrosococcus oceani ATCC 19707, complete genome3-oxoacyl-(acyl carrier protein) synthase7e-1581.6
NC_011725:1182000:119386111938611194793933Bacillus cereus B4264 chromosome, complete genome3-oxoacyl-ACP synthase8e-1581.6
NC_013192:664408:681268681268682245978Leptotrichia buccalis DSM 1135, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III1e-1480.9
NC_014010:175500:177157177157178140984Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeprobable 3-oxoacyl-acyl-carrier-protein synthase iii1e-1480.9
NC_019960:1362370:1365993136599313670121020Prevotella dentalis DSM 3688 chromosome 1, complete sequence3-oxoacyl-(acyl-carrier-protein) synthase III1e-1480.9
NC_008593:37456:425064250643480975Clostridium novyi NT, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III)2e-1480.5
NC_020419:870160:883655883655884641987Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, complete3-oxoacyl-[acyl-carrier-protein] synthase III2e-1480.5
NS_000191:870160:883655883655884641987Uncultured Termite group 1 bacterium phylotype Rs-D17, complete3-oxoacyl-[acyl-carrier-protein] synthase III2e-1480.5
NC_014734:353159:353159353159354148990Paludibacter propionicigenes WB4 chromosome, complete genome3-oxoacyL-(acyL-carrier-protein) synthase iii2e-1480.5
NC_004557:81362:8641886418874221005Clostridium tetani E88, complete genome3-oxoacyl-(acyl carrier protein) synthase3e-1479.7
NC_009662:383381:387699387699388697999Nitratiruptor sp. SB155-2, complete genome3-oxoacyl-(acyl carrier protein) synthase III4e-1479.3
NC_014393:4988127:500101050010105001987978Clostridium cellulovorans 743B chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III4e-1479.3
NC_004663:4977635:4989662498966249906691008Bacteroides thetaiotaomicron VPI-5482, complete genome3-oxoacyl-(acyl carrier protein) synthase3e-1479.3
NC_020291:1266885:128989412898941290865972Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3-oxoacyl-[acyl-carrier-protein] synthase 35e-1479
NC_013928:395028:415668415668416645978Streptococcus mutans NN2025, complete genome3-oxoacyl-ACP synthase III5e-1479
NC_017372:1212000:121346812134681214460993Helicobacter pylori India7 chromosome, complete genome3-oxoacyl-ACP synthase6e-1478.6
NC_021182:4882494:489492648949264895912987Clostridium pasteurianum BC1, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III6e-1478.6
NC_015687:3766000:377899837789983779975978Clostridium acetobutylicum DSM 1731 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III8e-1478.2
NC_003030:3763054:377741537774153778392978Clostridium acetobutylicum ATCC 824, complete genome3-oxoacyl-(acyl carrier protein) synthase8e-1478.2
NC_017295:3762622:377676737767673777744978Clostridium acetobutylicum EA 2018 chromosome, complete genome3-oxoacyl-ACP synthase8e-1478.2
NC_018528:1932000:195154719515471952530984Lactobacillus helveticus R0052 chromosome, complete genome3-oxoacyl-ACP synthase2e-1377
NC_015275:3299923:331258233125823313550969Clostridium lentocellum DSM 5427 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III2e-1376.6
NC_020134:1243122:126164912616491262641993Clostridium stercorarium subsp. stercorarium DSM 8532, complete3-oxoacyl-[acyl-carrier-protein] synthase 34e-1375.9
NC_017243:393749:397225397225398202978Brachyspira intermedia PWS/A chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III6e-1375.1
NC_010080:1885677:190283919028391903822984Lactobacillus helveticus DPC 4571, complete genomeAcyl-carier protein7e-1375.1
NC_014831:1140356:1156239115623911574951257Thermaerobacter marianensis DSM 12885 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III9e-1374.7
NC_015602:1949610:195007419500741951057984Lactobacillus kefiranofaciens ZW3 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase 31e-1274.3
NC_013939:148706:155019155019155996978Deferribacter desulfuricans SSM1, complete genome3-oxoacyl-ACP synthase III2e-1273.9
NC_017179:1239991:124722512472251248211987Clostridium difficile BI1, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III2e-1273.6
NC_013315:1230214:123744812374481238434987Clostridium difficile CD196 chromosome, complete genome3-oxoacyl-ACP synthase III2e-1273.6
NC_013316:1225797:123506412350641236050987Clostridium difficile R20291, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III2e-1273.6
NC_016632:951500:955396955396956349954Serratia symbiotica str. 'Cinara cedri' chromosome, complete3-oxoacyl-ACP synthase2e-1273.2
NC_013009:562470:566348566348567283936Neorickettsia risticii str. Illinois, complete genome3-oxoacyl-[acyl-carrier-protein] synthase 37e-1271.6
NC_015311:294283:3089993089993100181020Prevotella denticola F0289 chromosome, complete genomebeta-ketoacyl-acyl-carrier-protein synthase III8e-1271.6
NC_014933:270000:2761152761152771191005Bacteroides helcogenes P 36-108 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III1e-1171.2
NC_007086:1988000:200970920097092010707999Xanthomonas campestris pv. campestris str. 8004, complete genomeGumO1e-1170.9
NC_009617:1278000:128058212805821281553972Clostridium beijerinckii NCIMB 8052 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III1e-1170.9
NC_016787:1782951:1788835178883517898391005Corynebacterium diphtheriae HC03 chromosome, complete genome3-oxoacyl-ACP synthase2e-1170.1
NC_016788:1785287:1790864179086417918681005Corynebacterium diphtheriae HC04 chromosome, complete genome3-oxoacyl-ACP synthase2e-1170.1
NC_016790:1758000:1763236176323617642401005Corynebacterium diphtheriae VA01 chromosome, complete genome3-oxoacyl-ACP synthase2e-1170.1
NC_016802:1815098:1824077182407718250811005Corynebacterium diphtheriae HC02 chromosome, complete genome3-oxoacyl-ACP synthase2e-1170.1
NC_008245:1405000:141891414189141419885972Francisella tularensis subsp. tularensis FSC 198, complete genome3-oxoacyl-[acyl carrier protein] synthase III6e-1168.9
NC_006570:1405178:141910814191081420079972Francisella tularensis subsp. tularensis Schu 4, complete genome3-oxoacyl-[acyl carrier protein] synthase III6e-1168.9
NC_007880:1079634:108307910830791084050972Francisella tularensis subsp. holarctica, complete genome3-oxoacyl-[acyl carrier protein] synthase III5e-1168.9
NC_016012:805680:818098818098819075978Candidatus Arthromitus sp. SFB-rat-Yit, complete genome3-oxoacyl-(acyl carrier protein) synthase III5e-1168.9
NC_007798:547800:551656551656552591936Neorickettsia sennetsu str. Miyayama, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III5e-1168.9
NC_010677:707881:711689711689712660972Francisella tularensis subsp. mediasiatica FSC147, complete genome3-oxoacyl-[acyl-carrier-protein] synthase 35e-1168.9
NC_008601:1404933:141661014166101417581972Francisella tularensis subsp. novicida U112, complete genome3-oxoacyl-[acyl-carrier protein] synthase III5e-1168.9
NC_008369:1083598:108704310870431088014972Francisella tularensis subsp. holarctica OSU18, complete genome3-oxoacyl-[acyl-carrier-protein] synthase5e-1168.9
NC_009257:503371:505096505096506067972Francisella tularensis subsp. tularensis WY96-3418 chromosome,3-oxoacyl-(acyl-carrier-protein) synthase III5e-1168.9
NC_016937:1405000:141897314189731419944972Francisella tularensis subsp. tularensis TI0902 chromosome,3-oxoacyl-(acyl-carrier-protein) synthase KASIII5e-1168.9
NC_012778:1778654:179084417908441791779936Eubacterium eligens ATCC 27750, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III7e-1168.6
NC_016776:3587983:3588649358864935896621014Bacteroides fragilis 638R, complete genomeputative 3-oxoacyl-(acyl-carrier-protein) synthase III8e-1168.2
NC_014414:167803:177838177838178821984Parvularcula bermudensis HTCC2503 chromosome, complete genome3-oxoacyl-(acyl carrier protein) synthase9e-1168.2
NC_016938:1492486:150248315024831503457975Melissococcus plutonius DAT561 chromosome 1, complete genome3-oxoacyl-ACP synthase1e-1067.8
NC_016514:2647984:2677725267772526787951071Enterobacter cloacae EcWSU1 chromosome, complete genome3-oxoacyl-ACP synthase2e-1067.4
NC_016510:1874942:188261918826191883614996Flavobacterium columnare ATCC 49512 chromosome, complete genome3-oxoacyl-(acyl carrier protein) synthase III1e-1067.4
NC_016933:1481000:149488014948801495851972Francisella tularensis TIGB03 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase KASIII1e-1067.4
NC_010831:173499:177678177678178664987Chlorobium phaeobacteroides BS1, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III2e-1067
NC_014738:55782:5723157231582981068Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,beta-ketoacyl-acyl-carrier-protein synthase iii3e-1066.2
NC_006448:351998:373248373248374210963Streptococcus thermophilus LMG 18311, complete genome3-oxoacyl-(acyl carrier protein) synthase4e-1066.2
NC_014774:293800:311844311844312830987Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete3-oxoacyl-(acyl carrier protein) synthase II4e-1065.9
NC_010336:1468760:147251914725191473490972Francisella philomiragia subsp. philomiragia ATCC 25017, completeBeta-ketoacyl-acyl-carrier-protein synthase I1e-0964.3
NC_013517:2633574:263944026394402640420981Sebaldella termitidis ATCC 33386, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III1e-0964.3
NC_004668:2762464:276274427627442763709966Enterococcus faecalis V583, complete genome3-oxoacyl-(acyl carrier protein) synthase1e-0964.3
NC_005085:2609934:263146526314652632436972Chromobacterium violaceum ATCC 12472, complete genomeprobable 3-oxoacyl-[acyl-carrier-protein] synthase III2e-0963.9
NC_008025:430487:4461174461174471571041Deinococcus geothermalis DSM 11300, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III2e-0963.2
NC_003454:758726:776600776600777586987Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete3-oxoacyl-(acyl carrier protein) synthase3e-0962.8
NC_012658:3923546:393744039374403938420981Clostridium botulinum Ba4 str. 657 chromosome, complete genome3-oxoacyl-ACP synthase III6e-0962
NC_015499:1466794:148187714818771482857981Thermodesulfobium narugense DSM 14796 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 38e-0961.6
NC_009142:6199326:623806562380656239048984Saccharopolyspora erythraea NRRL 2338, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III1e-0861.2
NC_016609:1774259:1791996179199617930691074Niastella koreensis GR20-10 chromosome, complete genomebeta-ketoacyl-ACP synthase2e-0860.5
NC_002516:1031386:1081942108194210829551014Pseudomonas aeruginosa PAO1, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III6e-0858.9
NC_016610:1138995:116049911604991161494996Tannerella forsythia ATCC 43037 chromosome, complete genomebeta-ketoacyl-acyl-carrier-protein synthase III5e-0858.9
NC_014958:3393855:341004034100403411026987Deinococcus maricopensis DSM 21211 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 34e-0858.9
NC_009615:4425500:444230144423014443299999Parabacteroides distasonis ATCC 8503 chromosome, complete genome3-oxoacyl-ACP synthase2e-0757
NC_011770:4763506:4764405476440547654181014Pseudomonas aeruginosa LESB58, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III2e-0757
NC_018080:4465618:4465618446561844666311014Pseudomonas aeruginosa DK2 chromosome, complete genome3-oxoacyl-ACP synthase2e-0757
NC_008463:4566976:4566976456697645679891014Pseudomonas aeruginosa UCBPP-PA14, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III2e-0757
NC_010520:3938490:395238039523803953360981Clostridium botulinum A3 str. Loch Maree, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III2e-0756.6
NC_014011:1760793:1772516177251617735291014Aminobacterium colombiense DSM 12261 chromosome, complete genomeBeta-ketoacyl-acyl-carrier-protein synthase III3e-0756.6
NC_009656:4527457:4528356452835645293691014Pseudomonas aeruginosa PA7 chromosome, complete genome3-oxoacyl-ACP synthase4e-0756.2
NC_016642:3286654:330733833073383308330993Pseudovibrio sp. FO-BEG1 chromosome, complete genome3-oxoacyl-ACP synthase3e-0756.2
NC_012563:4101000:411490441149044115884981Clostridium botulinum A2 str. Kyoto, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III3e-0756.2
NC_012985:410307:411579411579412556978Candidatus Liberibacter asiaticus str. psy62, complete genome3-oxoacyl-(acyl carrier protein) synthase II3e-0756.2
NC_009495:3832500:384638638463863847366981Clostridium botulinum A str. ATCC 3502 chromosome, complete genome3-oxoacyl-ACP synthase5e-0755.8
NC_009697:3809044:382292038229203823900981Clostridium botulinum A str. ATCC 19397 chromosome, complete3-oxoacyl-ACP synthase5e-0755.8
NC_009698:3706154:372003037200303721010981Clostridium botulinum A str. Hall chromosome, complete genome3-oxoacyl-ACP synthase5e-0755.8
NC_009783:649500:6592086592086602241017Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein4e-0755.8
NC_009699:3940984:395486439548643955844981Clostridium botulinum F str. Langeland chromosome, complete genome3-oxoacyl-ACP synthase4e-0755.8
NC_017297:3939328:395320739532073954187981Clostridium botulinum F str. 230613 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III4e-0755.8
NC_010516:3903867:391773939177393918719981Clostridium botulinum B1 str. Okra, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III4e-0755.8
NC_014328:4546390:455917445591744560154981Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III5e-0755.5
NC_015391:1323171:133845313384531339427975Carnobacterium sp. 17-4 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III6e-0755.5
NC_007777:1170406:117372211737221174642921Frankia sp. CcI3, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III7e-0755.1
NC_015733:4253961:426814142681414269106966Pseudomonas putida S16 chromosome, complete genomebeta-ketoacyl-acyl-carrier-protein synthase I4e-0652.8
NC_014228:3591758:361082536108253611823999Xenorhabdus nematophila ATCC 19061, complete genomeputative 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III)8e-0651.6