Pre_GI Gene

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Host: NC_011770 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011770:4763506 Pseudomonas aeruginosa LESB58, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47635064764411906Quinolone signal response proteinQuickGO ontologyBLASTP
4764405476541810143-oxoacyl-acyl-carrier-protein synthase IIIQuickGO ontologyBLASTP
476546147665071047Homologous to beta-keto-acyl-acyl-carrier protein synthaseQuickGO ontologyBLASTP
47665004767351852Homologous to beta-keto-acyl-acyl-carrier protein synthaseQuickGO ontologyBLASTP
476734547688981554putative coenzyme A ligaseQuickGO ontologyBLASTP
47694564769977522methylated-DNA--protein- cysteinemethyltransferaseQuickGO ontologyBLASTP
477005747725762520usher CupC3QuickGO ontologyBLASTP
47726774773390714chaperone CupC2QuickGO ontologyBLASTP
47734484774047600fimbrial subunit CupC1QuickGO ontologyBLASTP
47745024774879378hypothetical proteinBLASTP
47754634776101639hypothetical proteinBLASTP
47764864777046561hypothetical proteinBLASTP
47771674777571405hypothetical proteinBLASTP
4777962477803473tRNA-LysQuickGO ontologyBLASTP
47780944778768675hypothetical proteinBLASTP
47787844779578795putative radical activating enzymeQuickGO ontologyBLASTP
47796514780475825hypothetical proteinBLASTP
47804854780991507Peptidoglycan associated lipoprotein OprL precursorQuickGO ontologyBLASTP
478104447823421299TolB proteinQuickGO ontologyBLASTP
478233947833821044TolA proteinQuickGO ontologyBLASTP
47833854783825441TolR proteinQuickGO ontologyBLASTP
47838484784543696TolQ proteinQuickGO ontologyBLASTP
47845454784991447hypothetical proteinBLASTP
478504447861021059Holliday junction DNA helicase RuvBQuickGO ontologyBLASTP
47861134786718606Holliday junction DNA helicase RuvAQuickGO ontologyBLASTP
47867354787259525Holliday junction resolvase RuvCQuickGO ontologyBLASTP
47873434788089747hypothetical proteinBLASTP
478815647899311776aspartyl-tRNA synthetaseQuickGO ontologyBLASTP