Pre_GI Gene

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Host: NC_018080 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018080:4465618 Pseudomonas aeruginosa DK2 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44647194465624906Quinolone signal response proteinQuickGO ontologyBLASTP
4465618446663110143-oxoacyl-ACP synthaseQuickGO ontologyBLASTP
446667444677201047beta-keto-acyl-acyl-carrier-like protein synthaseQuickGO ontologyBLASTP
44677134468564852beta-keto-acyl-acyl-carrier-like protein synthaseQuickGO ontologyBLASTP
446855844701111554coenzyme A ligaseQuickGO ontologyBLASTP
44704954470599105hypothetical protein
44706684471189522methylated-DNA--protein-cysteine methyltransferaseQuickGO ontologyBLASTP
447126944736862418usher CupC3QuickGO ontologyBLASTP
44738894474602714chaperone CupC2QuickGO ontologyBLASTP
44746604475259600fimbrial subunit CupC1QuickGO ontologyBLASTP
44757154476092378hypothetical proteinBLASTP
44766114477315705hypothetical proteinBLASTP
44777004478260561hypothetical proteinBLASTP
44783814478785405hypothetical proteinBLASTP
4479173447924876tRNA-LysQuickGO ontologyBLASTP
44793084479982675hypothetical proteinBLASTP
44799984480645648radical activating enzymeQuickGO ontologyBLASTP
44808654481506642tol-pal system protein YbgFQuickGO ontologyBLASTP
44816994482205507peptidoglycan-associated lipoproteinQuickGO ontologyBLASTP
448225844835561299translocation protein TolBQuickGO ontologyBLASTP
448355344845961044TolA proteinQuickGO ontologyBLASTP
44845994485039441TolR proteinQuickGO ontologyBLASTP
44850624485757696TolQ proteinQuickGO ontologyBLASTP
44857594486205447hypothetical proteinBLASTP
448625844873161059Holliday junction DNA helicase RuvBQuickGO ontologyBLASTP
44873274487932606Holliday junction DNA helicase RuvAQuickGO ontologyBLASTP
44879494488335387Holliday junction resolvaseQuickGO ontologyBLASTP
44885584489304747hypothetical proteinBLASTP