Pre_GI Gene

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Host: NC_020134 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020134:1243122 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
124006312431493087CoA-substrate-specific enzyme activaseQuickGO ontologyBLASTP
124312212443811260hypothetical proteinBLASTP
12444651245205741NAD-dependent deacetylase CobBQuickGO ontologyBLASTP
12453651245868504hypothetical proteinBLASTP
12458611246280420hypothetical protein
1246721124809413742-methylcitrate synthase PrpCQuickGO ontologyBLASTP
124821212519163705chromosome partition protein SmcQuickGO ontologyBLASTP
12519891252897909cell division protein FtsYQuickGO ontologyBLASTP
125303812545311494inosine-5-monophosphate dehydrogenase GuaBQuickGO ontologyBLASTP
12547311255489759translocation-enhancing protein TepAQuickGO ontologyBLASTP
12554861255752267hypothetical protein
125622112578251605D-3-phosphoglycerate dehydrogenase SerAQuickGO ontologyBLASTP
125794712592871341ribosomal protein S12 methylthiotransferase RimOQuickGO ontologyBLASTP
12593121259881570CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsAQuickGO ontologyBLASTP
12599981260642645transcription factor FapRQuickGO ontologyBLASTP
12606491261647999phosphate acyltransferase PlsXQuickGO ontologyBLASTP
126164912626419933-oxoacyl-acyl-carrier-protein synthase 3QuickGO ontologyBLASTP
12626611263593933malonyl CoA-acyl carrier protein transacylase FabDQuickGO ontologyBLASTP
126364312643807383-oxoacyl-acyl-carrier-protein reductase FabGQuickGO ontologyBLASTP