Pre_GI: BLASTP Hits

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Query: NC_020134:1243122:1259998 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1259998, End: 1260642, Length: 645

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:2723678:272574527257452726389645Clostridium clariflavum DSM 19732 chromosome, complete genomesugar metabolism transcriptional regulator1e-61235
NC_014964:1309845:132302213230221323624603Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completefatty acid biosynthesis transcriptional regulator protein8e-54209
NC_015958:1422319:143484114348411435443603Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genometranscription factor fapR1e-53209
NC_018664:1699618:171563917156391716199561Clostridium acidurici 9a chromosome, complete genomefatty acid biosynthesis transcriptional regulator7e-51200
NC_014831:1140356:115421411542141155203990Thermaerobacter marianensis DSM 12885 chromosome, complete genomeregulatory protein DeoR1e-41169
NC_019978:1410041:142428514242851424866582Halobacteroides halobius DSM 5150, complete genomeuncharacterized protein, possibly involved in aromatic compounds catabolism4e-38157
NC_017179:1239991:124560912456091246166558Clostridium difficile BI1, complete genomefatty acid biosynthesis transcriptional regulator3e-36151
NC_013315:1230214:123583212358321236389558Clostridium difficile CD196 chromosome, complete genomefatty acid biosynthesis transcriptional regulator3e-36151
NC_013316:1225797:123344812334481234005558Clostridium difficile R20291, complete genomeDeoR-family transcriptional regulator (fatty acid and phospholipid biosynthesis regulator)3e-36151
NC_014483:1954856:196606119660611966657597Paenibacillus polymyxa E681 chromosome, complete genomeTranscription factor fapR (Fatty acid and phospholipid biosynthesis regulator)4e-36151
NC_017208:3816753:386907538690753869668594Bacillus thuringiensis serovar chinensis CT-43 chromosome, completefatty acid biosynthesis transcriptional regulator3e-34145
NC_011725:3862094:387368338736833874276594Bacillus cereus B4264 chromosome, complete genomefatty acid biosynthesis transcriptional regulator2e-34145
NC_014103:4059905:406755740675574068120564Bacillus megaterium DSM319 chromosome, complete genometranscription factor FapR2e-34145
NC_008600:3686135:369845736984573699209753Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, DeoR family4e-34144
NC_005957:3665657:369063336906333691385753Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator of fatty acid biosynthesis4e-34144
NC_005945:3636321:366965436696543670406753Bacillus anthracis str. Sterne, complete genometranscriptional regulator of fatty acid biosynthesis4e-34144
NC_006274:3736703:374951737495173750269753Bacillus cereus E33L, complete genometranscriptional regulator of fatty acid biosynthesis4e-34144
NC_012472:3705500:371646337164633717056594Bacillus cereus 03BB102, complete genomehypothetical protein4e-34144
NC_011772:3821917:383940038394003840062663Bacillus cereus G9842, complete genomehypothetical protein4e-34144
NC_003997:3617000:366895936689593669552594Bacillus anthracis str. Ames, complete genometranscriptional regulator of fatty acid biosynthesis3e-34144
NC_003909:3606177:364436036443603644953594Bacillus cereus ATCC 10987, complete genometranscriptional regulator of fatty acid biosynthesis3e-34144
NC_007530:3616828:366908636690863669679594Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator of fatty acid biosynthesis3e-34144
NC_017200:3701043:371336537133653713958594Bacillus thuringiensis serovar finitimus YBT-020 chromosome,fatty acid biosynthesis transcriptional regulator3e-34144
NC_016779:3621973:363429536342953634888594Bacillus cereus F837/76 chromosome, complete genomephosphate:acyl-ACP acyltransferase PlsX3e-34144
NC_016771:3599170:360950736095073610100594Bacillus cereus NC7401, complete genomehypothetical protein3e-34144
NC_012659:3617000:366898636689863669579594Bacillus anthracis str. A0248, complete genomefatty acid biosynthesis transcriptional regulator3e-34144
NC_012581:559182:569007569007569600594Bacillus anthracis str. CDC 684 chromosome, complete genomefatty acid biosynthesis transcriptional regulator3e-34144
NC_011773:3689473:370385037038503704443594Bacillus cereus AH820 chromosome, complete genomefatty acid biosynthesis transcriptional regulator3e-34144
NC_011658:3603009:365700936570093657602594Bacillus cereus AH187 chromosome, complete genomefatty acid biosynthesis transcriptional regulator3e-34144
NC_004193:1558551:156591515659151566490576Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator of fatty acid biosynthesis1e-33143
NC_010184:3713359:372773537277353728328594Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, DeoR family1e-33142
NC_014622:2114244:212551921255192126058540Paenibacillus polymyxa SC2 chromosome, complete genomefatty acid biosynthesis transcriptional regulating protein3e-33141
NC_009848:1542978:154297815429781543544567Bacillus pumilus SAFR-032, complete genomefatty acid biosynthesis transcriptional regulator2e-32139
UCMB5137:1159520:116167211616721162238567Bacillus atrophaeus UCMB-5137fatty acid biosynthesis transcriptional regulator2e-32139
NC_002973:1846000:186347018634701864039570Listeria monocytogenes str. 4b F2365, complete genometranscriptional regulator of fatty acid biosynthesis1e-32139
NC_010382:1607013:160920316092031609781579Lysinibacillus sphaericus C3-41, complete genometranscription factor fapR (Fatty acid and phospholipid biosynthesis regulator)3e-31134
NC_020164:1590221:160884516088451609414570Staphylococcus warneri SG1, complete genomefatty acid biosynthesis transcriptional regulator7e-31133
NC_019903:2708500:272306827230682723637570Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,hypothetical protein3e-30131
NC_014335:3589726:361981536198153620306492Bacillus cereus biovar anthracis str. CI chromosome, completehypothetical protein6e-28124
NC_017353:1750971:176486317648631765432570Staphylococcus lugdunensis N920143, complete genometranscription factor fapr3e-25115
NC_013893:1723939:174147417414741742043570Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTranscription factor fapR3e-25115
NC_012121:837586:849095849095849658564Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative transcription factor FapR3e-22105
NC_003413:1107965:112162811216281122020393Pyrococcus furiosus DSM 3638, complete genomehypothetical protein4e-0858.2