Pre_GI: BLASTP Hits

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Query: NC_020134:1243122:1248212 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1248212, End: 1251916, Length: 3705

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018664:1699618:1703870170387017074513582Clostridium acidurici 9a chromosome, complete genomechromosome segregation protein Smc0849
NC_014483:1954856:1973233197323319768023570Paenibacillus polymyxa E681 chromosome, complete genomeChromosome partition protein smc0748
NC_014483:1973233:1973233197323319768023570Paenibacillus polymyxa E681 chromosome, complete genomeChromosome partition protein smc0748
NC_014622:2114244:2132633213263321362023570Paenibacillus polymyxa SC2 chromosome, complete genomechromosome segregation protein smc0746
NC_014964:1309845:1310797131079713143873591Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completechromosome segregation protein SMC0745
NC_014833:3444550:3467745346774534713203576Ruminococcus albus 7 chromosome, complete genomechromosome segregation protein SMc0728
NC_010382:1607013:1613947161394716175223576Lysinibacillus sphaericus C3-41, complete genomechromosome partition protein smc0706
NC_017208:3816753:3861571386157138651403570Bacillus thuringiensis serovar chinensis CT-43 chromosome, completechromosome partition protein smc0704
NC_011772:3821917:3831896383189638354653570Bacillus cereus G9842, complete genomechromosome segregation SMC protein0701
NC_019903:2708500:2710454271045427140503597Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,chromosome segregation protein SMC0699
NC_011725:3862094:3866180386618038697493570Bacillus cereus B4264 chromosome, complete genomechromosome segregation protein SMC0698
NC_006274:3736703:3742014374201437455833570Bacillus cereus E33L, complete genomechromosome segregation SMC protein0698
NC_011969:3575988:3593464359346435970333570Bacillus cereus Q1 chromosome, complete genomechromosome segregation smc protein0696
NC_003909:3606177:3636856363685636404253570Bacillus cereus ATCC 10987, complete genomechromosome segregation SMC protein0695
NC_011658:3603009:3649505364950536530743570Bacillus cereus AH187 chromosome, complete genomechromosome segregation SMC protein0695
NC_016771:3599170:3602003360200336055723570Bacillus cereus NC7401, complete genomechromosome segregation protein SMC0695
NC_017200:3701043:3705861370586137094303570Bacillus thuringiensis serovar finitimus YBT-020 chromosome,chromosome segregation protein SMC0695
NC_011773:3689473:3696347369634736999163570Bacillus cereus AH820 chromosome, complete genomechromosome segregation protein SMC0694
NC_012472:3705500:3708960370896037125293570Bacillus cereus 03BB102, complete genomechromosome segregation SMC protein0694
NC_008600:3686135:3690954369095436945233570Bacillus thuringiensis str. Al Hakam, complete genomechromosome segregation SMC protein0694
NC_016779:3621973:3626791362679136303603570Bacillus cereus F837/76 chromosome, complete genomeChromosome partition protein smc0694
NC_014335:3589726:3612312361231236158813570Bacillus cereus biovar anthracis str. CI chromosome, completechromosome segregation SMC protein0694
NC_005957:3665657:3683130368313036866993570Bacillus thuringiensis serovar konkukian str. 97-27, completechromosome segregation SMC protein0693
NC_012659:3617000:3661483366148336650523570Bacillus anthracis str. A0248, complete genomechromosome segregation SMC protein0693
NC_012581:559182:5735345735345771033570Bacillus anthracis str. CDC 684 chromosome, complete genomechromosome segregation protein SMC0693
NC_003997:3617000:3661456366145636650253570Bacillus anthracis str. Ames, complete genomechromosome segregation SMC protein0693
NC_007530:3616828:3661583366158336651523570Bacillus anthracis str. 'Ames Ancestor', complete genomechromosome segregation smc protein0693
NC_005945:3636321:3662151366215136657203570Bacillus anthracis str. Sterne, complete genomechromosome segregation SMC protein0693
NC_010184:3713359:3720230372023037237993570Bacillus weihenstephanensis KBAB4, complete genomechromosome segregation protein SMC0690
NC_002973:1846000:1855948185594818595083561Listeria monocytogenes str. 4b F2365, complete genomechromosome segregation SMC protein0683
NC_015391:1013608:1018025101802510215973573Carnobacterium sp. 17-4 chromosome, complete genomechromosome condensation and segregation SMC ATPase0682
NC_012121:837586:8535668535668571353570Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative chromosome segregation protein SMC0647
NC_017353:1750971:1757317175731717608863570Staphylococcus lugdunensis N920143, complete genomeputative chromosome partition protein0645
NC_013893:1723939:1733928173392817374973570Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeChromosome partition protein smc0645
NC_014624:2668157:2676598267659826801763579Eubacterium limosum KIST612 chromosome, complete genomechromosome segregation protein SMC3e-169596
NC_007929:653814:6695106695106730463537Lactobacillus salivarius subsp. salivarius UCC118, complete genomeChromosome partition protein6e-168592
NC_015958:1422319:1422319142231914259093591Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomechromosome segregation protein SMC8e-142505
NC_004193:1558551:1571140157114015747063567Oceanobacillus iheyensis HTE831, complete genomechromosome segregation SMC protein2e-129464
UCMB5137:1159520:1166256116625611698163561Bacillus atrophaeus UCMB-5137chromosome segregation SMC protein2e-128461
NC_007907:2995889:3022268302226830258643597Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-127457
NC_014103:4059905:4059905405990540634653561Bacillus megaterium DSM319 chromosome, complete genomechromosome segregation protein SMC6e-122439
NC_016630:864601:8733878733878769293543Filifactor alocis ATCC 35896 chromosome, complete genomeSMC family protein7e-117422
NC_006624:873525:8914388914388950073570Thermococcus kodakarensis KOD1, complete genomechromosome segregation ATPase1e-115418
NC_015474:328500:3316583316583351943537Pyrococcus sp. NA2 chromosome, complete genomechromosome segregation protein smc19e-112405
NC_014253:2113233:2120466212046621239903525Methanohalobium evestigatum Z-7303 chromosome, complete genomechromosome segregation protein SMC3e-106387
NC_014328:1379437:1383006138300613865693564Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative chromosome segregation protein4e-104380
NC_020291:1437431:1440913144091314444763564Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomechromosome partition protein Smc2e-103377
NC_014002:1772060:1782218178221817857393522Methanohalophilus mahii DSM 5219 chromosome, complete genomecondensin subunit Smc6e-102373
NC_015676:2099930:2107201210720121107253525Methanosalsum zhilinae DSM 4017 chromosome, complete genomechromosome segregation protein SMC7e-102372
NC_018876:1489895:1496630149663015001723543Methanolobus psychrophilus R15 chromosome, complete genomecondensin subunit Smc3e-100367
NC_010520:2635750:2646234264623426498153582Clostridium botulinum A3 str. Loch Maree, complete genomechromosome segregation protein SMC6e-98359
NC_009848:1542978:1547610154761015511703561Bacillus pumilus SAFR-032, complete genomechromosome segregation protein Smc6e-98359
NC_009975:1163918:1180777118077711843463570Methanococcus maripaludis C6, complete genomechromosome segregation protein SMC2e-97358
NC_009135:130159:1470201470201505893570Methanococcus maripaludis C5, complete genomechromosome segregation protein SMC2e-97357
NC_012658:2641446:2641446264144626450273582Clostridium botulinum Ba4 str. 657 chromosome, complete genomechromosome segregation protein SMC4e-97357
NC_009637:646092:6460926460926496613570Methanococcus maripaludis C7 chromosome, complete genomechromosome segregation protein SMC4e-97357
NC_019977:65205:7325473254767753522Methanomethylovorans hollandica DSM 15978, complete genomechromosome segregation protein SMC1e-96355
NC_009698:2420484:2427583242758324311643582Clostridium botulinum A str. Hall chromosome, complete genomechromosome segregation protein SMC4e-96353
NC_009495:2571732:2583216258321625867973582Clostridium botulinum A str. ATCC 3502 chromosome, complete genomechromosome segregation protein SMC5e-96353
NC_010516:2567911:2571430257143025750113582Clostridium botulinum B1 str. Okra, complete genomechromosome segregation protein SMC5e-96353
NC_010003:1444623:1452272145227214557963525Petrotoga mobilis SJ95, complete genomeSMC domain protein6e-95350
NC_005791:1377736:1377736137773613813053570Methanococcus maripaludis S2, complete genomestructural maintenance of chromosome protein1e-94348
NC_015847:1462068:1462068146206814656373570Methanococcus maripaludis XI chromosome, complete genomechromosome segregation protein SMC1e-94348
NC_009634:759372:7593727593727629413570Methanococcus vannielii SB chromosome, complete genomechromosome segregation protein SMC3e-87324
NC_011830:4031901:4049760404976040533563597Desulfitobacterium hafniense DCB-2, complete genomechromosome segregation protein SMC3e-86321
NC_016584:4860360:4887531488753148911273597Desulfosporosinus orientis DSM 765 chromosome, complete genomechromosome segregation protein SMC4e-84313
NC_007796:31691:3521435214386543441Methanospirillum hungatei JF-1, complete genomeChromosome segregation protein SMC1e-78295
NC_005877:864118:8721218721218755733453Picrophilus torridus DSM 9790, complete genomechromosome partition protein smc5e-76286
NC_015954:2405527:2409001240900124126603660Halophilic archaeon DL31 chromosome, complete genomechromosome segregation protein SMC3e-75284
NC_014158:1651326:1655746165574616593303585Tsukamurella paurometabola DSM 20162 chromosome, complete genomechromosome segregation protein SMC3e-72274
NC_016605:1033000:1039854103985410434023549Pediococcus claussenii ATCC BAA-344 chromosome, complete genomechromosome segregation protein SMC2e-71271
NC_016633:541559:5457405457405485892850Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeRecF/RecN/SMC N-terminal domain-containing protein7e-70266
NC_013720:1605240:1626638162663816302853648Pirellula staleyi DSM 6068, complete genomechromosome segregation protein SMC1e-69265
NC_017317:1598925:1602742160274216062243483Corynebacterium ulcerans 809 chromosome, complete genomechromosome partition protein5e-68260
NC_017303:1454841:1460451146045114639333483Corynebacterium pseudotuberculosis I19 chromosome, complete genomeChromosome partition protein smc3e-67257
NC_014654:1529500:1539567153956715431873621Halanaerobium sp. 'sapolanicus' chromosome, complete genomechromosome segregation protein SMC2e-65252
NC_013410:3358008:3358818335881833623723555Fibrobacter succinogenes subsp. succinogenes S85 chromosome,chromosome segregation protein SMC2e-64248
NC_015562:899030:9228269228269263713546Methanotorris igneus Kol 5 chromosome, complete genomechromosome segregation protein SMC3e-63244
NC_020164:1590221:1601212160121216047813570Staphylococcus warneri SG1, complete genomechromosome segregation SMC protein3e-63244
NC_007295:856169:8600068600068629452940Mycoplasma hyopneumoniae J, complete genomeputative ABC transporter ATP-binding protein P115-like6e-62240
NC_008278:6279553:6280891628089162846403750Frankia alni ACN14a, complete genomeChromosome partition protein smc4e-62240
NC_013861:3215640:3234681323468132381753495Legionella longbeachae NSW150, complete genomechromosome partition protein smc2e-61238
NC_013715:890784:8951728951728985343363Rothia mucilaginosa DY-18, complete genomechromosome segregation ATPase1e-60235
NC_013511:573717:5841265841265870622937Mycoplasma hominis, complete genomeP115-like (Mycoplasma hyorhinis) ABCtransporter ATP-binding protein3e-60234
NC_020829:3434736:3452498345249834559863489Pseudomonas denitrificans ATCC 13867, complete genomechromosome segregation protein SMC1e-59232
NC_006368:3028286:3044524304452430480183495Legionella pneumophila str. Paris, complete genomehypothetical protein4e-58227
NC_009494:3119997:3134055313405531375493495Legionella pneumophila str. Corby chromosome, complete genomechromosome segregation SMC protein4e-58227
NC_014125:3054000:3068060306806030715543495Legionella pneumophila 2300/99 Alcoy chromosome, complete genomechromosome segregation protein SMC4e-58227
NC_006369:2888701:2901597290159729050913495Legionella pneumophila str. Lens, complete genomehypothetical protein2e-57225
NC_008027:1847040:1847703184770318511913489Pseudomonas entomophila L48, complete genomechromosome segregation SMC protein.2e-57225
NC_016811:2903871:2917929291792929214233495Legionella pneumophila subsp. pneumophila ATCC 43290 chromosome,chromosome segregation protein SMC4e-57224
NC_002942:2943206:2957264295726429607583495Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chromosome segregation SMC protein4e-57224
NC_010501:3987615:4009302400930240127903489Pseudomonas putida W619, complete genomechromosome segregation protein SMC7e-57223
NC_020541:1786500:1820610182061018241193510Rhodanobacter sp. 2APBS1, complete genomechromosome segregation protein SMC2e-56222
NC_007955:1566189:1575058157505815785823525Methanococcoides burtonii DSM 6242, complete genomeChromosome segregation protein SMC2e-54215
NC_008789:2057368:2058614205861420621113498Halorhodospira halophila SL1, complete genomechromosome segregation protein SMC8e-53209
NC_012785:205502:2108372108372143583522Kosmotoga olearia TBF 19.5.1, complete genomechromosome segregation protein SMC2e-52208
NC_015222:983647:9900649900649936153552Nitrosomonas sp. AL212 chromosome, complete genomechromosome segregation protein SMC8e-52206
NC_007332:878655:8786558786558815942940Mycoplasma hyopneumoniae 7448, complete genomeABC transporter ATP-binding protein P115-like3e-50201
NC_010531:428000:4474274474274508853459Polynucleobacter necessarius STIR1, complete genomechromosome segregation protein SMC6e-50200
NC_008312:2349500:2364599236459923682583660Trichodesmium erythraeum IMS101, complete genomechromosome segregation protein SMC2e-49198
NC_013741:27353:3290732907363143408Archaeoglobus profundus DSM 5631, complete genomechromosome segregation protein SMC1e-48195
NC_015738:1858455:1871190187119018747563567Eggerthella sp. YY7918, complete genomechromosome segregation ATPase2e-48195
NC_000909:1615927:1623474162347416269833510Methanocaldococcus jannaschii DSM 2661, complete genomechromosome segretation protein (smc1)2e-41172
NC_014122:967194:9637719637719671993429Methanocaldococcus infernus ME chromosome, complete genomechromosome segregation protein SMC7e-40167
NC_011297:787932:8039248039248071783255Dictyoglomus thermophilum H-6-12, complete genomechromosome segregation SMC protein2e-36155
NC_011661:961129:9747549747549780023249Dictyoglomus turgidum DSM 6724, complete genomeSMC domain protein5e-36154
NC_010730:180000:1883401883401918583519Sulfurihydrogenibium sp. YO3AOP1, complete genomechromosome segregation protein SMC2e-33145
NC_002578:828000:8322598322598356813423Thermoplasma acidophilum DSM 1728, complete genomechromosome segregation protein related ptotein4e-30134
NC_005070:334952:3349523349523385633612Synechococcus sp. WH 8102, complete genomeputative chromosome segregation protein, SMC ATPase superfamily9e-28126
NC_007513:438438:4384384384384420523615Synechococcus sp. CC9902, complete genomeChromosome segregation protein SMC3e-27125
NC_009481:1927995:1945623194562319492283606Synechococcus sp. WH 7803 chromosome, complete genomechromosome segregation ATPase5e-26120
NC_015636:1603664:1611552161155216145452994Methanothermococcus okinawensis IH1 chromosome, complete genomeDNA double-strand break repair rad50 ATPase5e-0757.8