Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:3987615 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39876153988163549adenine phosphoribosyltransferaseQuickGO ontologyBLASTP
39882743988876603recombination protein RecRQuickGO ontologyBLASTP
39890813989416336hypothetical proteinBLASTP
398948039915492070DNA polymerase III subunits gamma and tauQuickGO ontologyBLASTP
39916883992173486hypothetical proteinBLASTP
39922563992669414transcriptional regulator MerR familyQuickGO ontologyBLASTP
399294939942741326integrase family proteinQuickGO ontologyBLASTP
39949883995743756phage antirepressor proteinQuickGO ontologyBLASTP
39959333996856924hypothetical protein
39979263998156231transcriptional regulator XRE familyQuickGO ontologyBLASTP
39984263998668243hypothetical protein
39993524000065714Resolvase domainQuickGO ontologyBLASTP
40002934001057765hypothetical protein
40017274002077351hypothetical proteinBLASTP
400239140035151125RNA-directed DNA polymerase reverse transcriptaseQuickGO ontologyBLASTP
40043044005137834hypothetical protein
400560640079362331DNA ligase NAD-dependentQuickGO ontologyBLASTP
40082134009097885cell division protein ZipAQuickGO ontologyBLASTP
400930240127903489chromosome segregation protein SMCQuickGO ontologyBLASTP
40127944013453660transcriptional regulator GntR familyQuickGO ontologyBLASTP
401372140151751455xanthine dehydrogenase small subunitQuickGO ontologyBLASTP
401516840175672400xanthine dehydrogenase molybdopterin binding subunitQuickGO ontologyBLASTP