Pre_GI: BLASTP Hits

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Query: NC_020134:1243122:1246721 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1246721, End: 1248094, Length: 1374

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014364:2693840:2713516271351627148681353Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCitrate synthase9e-153540
NC_012778:364728:3830583830583844611404Eubacterium eligens ATCC 27750, complete genome2-methylcitrate synthase5e-130464
NC_016048:2734563:2751077275107727524501374Oscillibacter valericigenes Sjm18-20, complete genomecitrate synthase4e-128458
NC_015977:2966971:2976773297677329781191347Roseburia hominis A2-183 chromosome, complete genomecitrate synthase1e-125450
NC_015977:3215770:3254383325438332557291347Roseburia hominis A2-183 chromosome, complete genomecitrate synthase1e-125450
NC_014933:3942156:3945108394510839464511344Bacteroides helcogenes P 36-108 chromosome, complete genomeCitrate synthase2e-115416
NC_013192:1504310:1522991152299115243221332Leptotrichia buccalis DSM 1135, complete genomeCitrate (Si)-synthase1e-113410
NC_014150:3053859:3058444305844430597871344Brachyspira murdochii DSM 12563 chromosome, complete genomeCitrate (Si)-synthase3e-112405
NC_013202:771161:8086428086428097781137Halomicrobium mukohataei DSM 12286, complete genome2-methylcitrate synthase/citrate synthase II2e-49196
NC_012560:2315350:2317033231703323181961164Azotobacter vinelandii DJ, complete genome2-methylcitrate synthase8e-49194
NC_021150:2315362:2317045231704523182081164Azotobacter vinelandii CA6, complete genomemethylcitrate synthase8e-49194
NC_016751:2044379:2066197206619720673211125Marinitoga piezophila KA3 chromosome, complete genome2-methylcitrate synthase/citrate synthase II1e-48194
NC_017278:1873934:1874789187478918759221134Thermus sp. CCB_US3_UF1 chromosome, complete genomeCitrate synthase2e-48193
NC_014221:792363:8075638075638087051143Truepera radiovictrix DSM 17093 chromosome, complete genome2-methylcitrate synthase/citrate synthase II9e-48191
NC_014618:1452927:1454396145439614555651170Enterobacter cloacae SCF1 chromosome, complete genome2-methylcitrate synthase/citrate synthase II1e-44181
NC_015666:1293500:1293606129360612947541149Halopiger xanaduensis SH-6 chromosome, complete genome2-methylcitrate synthase/citrate synthase II1e-44181
NC_012721:2694829:2694829269482926959981170Burkholderia glumae BGR1 chromosome 2, complete genomeCitrate synthase2e-44180
NC_004917:366104:3854213854213865691149Helicobacter hepaticus ATCC 51449, complete genomecitrate synthase PrpC6e-44178
NC_010483:642577:6562586562586573611104Thermotoga sp. RQ2, complete genome2-methylcitrate synthase/citrate synthase II2e-43177
NC_013642:942767:9631229631229642251104Thermotoga naphthophila RKU-10, complete genome2-methylcitrate synthase/citrate synthase II2e-43177
NC_009342:841500:8621798621798633301152Corynebacterium glutamicum R chromosome, complete genomecitrate synthase4e-43176
NC_003413:214120:2178282178282189611134Pyrococcus furiosus DSM 3638, complete genomecitrate synthase2e-42173
NC_007335:1474455:1491575149157514927021128Prochlorococcus marinus str. NATL2A, complete genomecitrate synthase3e-42173
NC_008819:199760:2168762168762180031128Prochlorococcus marinus str. NATL1A, complete genomeCitrate synthase8e-42171
NC_014394:93344:1118541118541130021149Gallionella capsiferriformans ES-2 chromosome, complete genome2-methylcitrate synthase/citrate synthase II1e-41171
NC_016779:4361140:4363551436355143646991149Bacillus cereus F837/76 chromosome, complete genomeCitrate synthase9e-41168
NC_019940:2931500:2956404295640429575581155Thioflavicoccus mobilis 8321 chromosome, complete genome2-methylcitrate synthase/citrate synthase II2e-40167
NC_017200:4401945:4405571440557144066861116Bacillus thuringiensis serovar finitimus YBT-020 chromosome,citrate synthase5e-40166
NC_010794:303203:3450823450823462121131Methylacidiphilum infernorum V4, complete genomeCitrate synthase5e-40165
NC_007645:2779381:2779381277938127805081128Hahella chejuensis KCTC 2396, complete genomeCitrate synthase5e-40165
NC_012659:4399094:4401505440150544026531149Bacillus anthracis str. A0248, complete genomecitrate synthase8e-40165
NC_014335:4327584:4329995432999543311101116Bacillus cereus biovar anthracis str. CI chromosome, completecitrate synthase1e-39164
NC_006274:4448293:4449746444974644508611116Bacillus cereus E33L, complete genomecitrate synthase1e-39164
NC_016771:4333000:4333057433305743341721116Bacillus cereus NC7401, complete genomecitrate synthase CitZ1e-39164
NC_014171:4447856:4450267445026744513821116Bacillus thuringiensis BMB171 chromosome, complete genomemethylcitrate synthase1e-39164
NC_011658:4379274:4379274437927443804221149Bacillus cereus AH187 chromosome, complete genomecitrate synthase1e-39164
NC_011773:4461758:4463211446321144643591149Bacillus cereus AH820 chromosome, complete genomecitrate synthase1e-39164
NC_007530:4400152:4401605440160544027201116Bacillus anthracis str. 'Ames Ancestor', complete genomecitrate synthase1e-39164
NC_005945:4399756:4402167440216744032821116Bacillus anthracis str. Sterne, complete genomecitrate synthase1e-39164
NC_003997:4399067:4401478440147844025931116Bacillus anthracis str. Ames, complete genomecitrate synthase1e-39164
NC_005042:165530:1827901827901839681179Prochlorococcus marinus subsp. marinus str. CCMP1375, completecitrate synthase2e-39163
NC_009674:3344000:3347213334721333483731161Bacillus cytotoxicus NVH 391-98 chromosome, complete genomecitrate synthase3e-39163
NC_003106:1809137:1823448182344818245841137Sulfolobus tokodaii str. 7, complete genomecitrate synthase7e-39162
NC_010184:4425676:4427129442712944282441116Bacillus weihenstephanensis KBAB4, complete genome2-methylcitrate synthase/citrate synthase II4e-39162
NC_015733:2658337:2688190268819026894701281Pseudomonas putida S16 chromosome, complete genomemethylcitrate synthase1e-38161
NC_015474:1490668:1501434150143415025191086Pyrococcus sp. NA2 chromosome, complete genomecitrate synthase1e-38160
NC_014039:2386347:2398354239835423996401287Propionibacterium acnes SK137 chromosome, complete genomecitrate (Si)-synthase8e-38158
NC_016511:2389273:2401280240128024025661287Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecitrate (Si)-synthase8e-38158
NC_016512:2388612:2400619240061924019051287Propionibacterium acnes TypeIA2 P.acn17 chromosome, completecitrate (Si)-synthase8e-38158
NC_016516:2380131:2392139239213923934251287Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecitrate (Si)-synthase8e-38158
NC_003155:6444500:6458679645867964599681290Streptomyces avermitilis MA-4680, complete genomecitrate synthase2e-37157
NC_005085:1096000:1115356111535611166631308Chromobacterium violaceum ATCC 12472, complete genomecitrate synthase1e-36154
NC_018750:6070260:6074318607431860754511134Streptomyces venezuelae ATCC 10712, complete genome2-methylcitrate synthase1e-36154
NC_013929:6526745:6539514653951465408031290Streptomyces scabiei 87.22 chromosome, complete genomecitrate synthase1e-36154
NC_007164:511171:5111715111715124481278Corynebacterium jeikeium K411, complete genomehypothetical protein1e-36154
NC_007912:2697581:2697581269758126989451365Saccharophagus degradans 2-40, complete genomeCitrate (Si)-synthase3e-36153
NC_009073:529148:5343575343575355951239Pyrobaculum calidifontis JCM 11548, complete genome2-methylcitrate synthase/citrate synthase II9e-36151
NC_009925:4044691:4049124404912440503171194Acaryochloris marina MBIC11017, complete genome2-methylcitrate synthase/citrate synthase II2e-35150
NC_014472:791855:7991197991198004021284Flavobacteriales bacterium HTCC2170 chromosome, complete genomecitrate synthase1e-35150
NC_019978:2293327:2297397229739722986381242Halobacteroides halobius DSM 5150, complete genomecitrate synthase3e-35149
NC_015167:2415604:2441046244104624423291284Cellulophaga lytica DSM 7489 chromosome, complete genomecitrate synthase I6e-35149
NC_012779:2755338:2763537276353727648201284Edwardsiella ictaluri 93-146, complete genomecitrate (Si)-synthase, putative7e-35148
NC_006511:2090058:2093309209330920945921284Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcitrate synthase2e-34147
NC_011147:2085241:2088492208849220897751284Salmonella enterica subsp. enterica serovar Paratyphi A strtype II citrate synthase3e-34146
NC_011080:780850:8005658005658018481284Salmonella enterica subsp. enterica serovar Newport str. SL254,citrate (Si)-synthase4e-34145
NC_016860:816000:8347848347848360671284Salmonella enterica subsp. enterica serovar Typhimurium strtype II citrate synthase4e-34145
NC_003197:776238:7959547959547972371284Salmonella typhimurium LT2, complete genomecitrate synthase4e-34145
NC_016832:2201860:2205844220584422071271284Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Citrate synthase7e-34145
NC_004631:2205821:2209072220907222103551284Salmonella enterica subsp. enterica serovar Typhi Ty2, completecitrate synthase7e-34145
NC_003198:751779:7707347707347720171284Salmonella enterica subsp. enterica serovar Typhi str. CT18,citrate synthase7e-34145
NC_011083:824659:8443638443638456461284Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,citrate (Si)-synthase4e-34145
NC_010102:2322866:2326850232685023281331284Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-34145
NC_011094:842038:8617038617038629861284Salmonella enterica subsp. enterica serovar Schwarzengrund strtype II citrate synthase4e-34145
NC_016810:775649:7953657953657966481284Salmonella enterica subsp. enterica serovar Typhimurium strcitrate synthase4e-34145
NC_016856:776735:7964517964517977341284Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype II citrate synthase4e-34145
NC_016857:775649:7953657953657966481284Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type II citrate synthase4e-34145
NC_016863:776734:7964507964507977331284Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type II citrate synthase4e-34145
NC_017046:775636:7953517953517966341284Salmonella enterica subsp. enterica serovar Typhimurium str. 798citrate synthase4e-34145
NC_012489:652319:6714686714686728231356Gemmatimonas aurantiaca T-27, complete genomecitrate synthase2e-33144
NC_013162:1130554:1134954113495411362371284Capnocytophaga ochracea DSM 7271, complete genomecitrate synthase I1e-33144
NC_014006:850763:9022219022219035071287Sphingobium japonicum UT26S chromosome 1, complete genomecitrate synthase I2e-33143
NC_013722:2810721:2814165281416528154541290Xanthomonas albilineans, complete genomeputative citrate synthase protein2e-33143
NC_014335:2151404:2158651215865121597721122Bacillus cereus biovar anthracis str. CI chromosome, completecitrate synthase2e-33143
NC_011773:2239753:2246313224631322474341122Bacillus cereus AH820 chromosome, complete genomecitrate synthase 33e-33143
NC_011772:2166000:2172288217228821734091122Bacillus cereus G9842, complete genomecitrate (Si)-synthase MmgD5e-33142
NC_009434:2006500:2017937201793720192081272Pseudomonas stutzeri A1501, complete genometype II citrate synthase5e-33142
NC_015740:1845370:1855567185556718568381272Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype II citrate synthase5e-33142
NC_015572:319725:3315543315543328491296Methylomonas methanica MC09 chromosome, complete genomecitrate synthase I5e-33142
NC_011658:2275864:2281804228180422829251122Bacillus cereus AH187 chromosome, complete genomecitrate synthase 35e-33142
NC_005957:2196000:2202017220201722031351119Bacillus thuringiensis serovar konkukian str. 97-27, completecitrate synthase4e-33142
NC_007530:2175967:2182486218248621836041119Bacillus anthracis str. 'Ames Ancestor', complete genomecitrate synthase4e-33142
NC_003997:2175843:2182362218236221834801119Bacillus anthracis str. Ames, complete genomecitrate synthase4e-33142
NC_005945:2175871:2182468218246821835861119Bacillus anthracis str. Sterne, complete genomecitrate synthase4e-33142
NC_012472:2240000:2246131224613122472521122Bacillus cereus 03BB102, complete genomecitrate (Si)-synthase MmgD4e-33142
NC_012659:2175867:2182383218238321835041122Bacillus anthracis str. A0248, complete genomecitrate synthase 34e-33142
NC_014171:2177353:2184866218486621859871122Bacillus thuringiensis BMB171 chromosome, complete genomecitrate synthase 38e-33141
NC_011725:2206000:2212722221272222138431122Bacillus cereus B4264 chromosome, complete genomecitrate synthase 38e-33141
NC_007963:1370903:1387017138701713883031287Chromohalobacter salexigens DSM 3043, complete genomeCitrate synthase I2e-32140
NC_017025:653217:6774776774776787601284Flavobacterium indicum GPTSA100-9, complete genomecitrate (Si)-synthase4e-32139
NC_008767:927810:9281709281709294531284Neisseria meningitidis FAM18, complete genomeputative citrate synthase3e-32139
NC_017160:1507500:1507643150764315088991257Yersinia pestis D182038 chromosome, complete genomecitrate synthase GltA9e-31135
NC_008786:1553833:1560547156054715618811335Verminephrobacter eiseniae EF01-2, complete genomecitrate synthase I8e-31135
NC_010634:1342393:1362843136284313641231281Yersinia pseudotuberculosis PB1/+, complete genomecitrate synthase I6e-31135
NC_010159:1417993:1435550143555014368301281Yersinia pestis Angola, complete genomecitrate synthase I6e-31135
NC_008149:3251196:3251196325119632524761281Yersinia pestis Nepal516, complete genomecitrate synthase GltA6e-31135
NC_005810:1130251:1130251113025111315311281Yersinia pestis biovar Microtus str. 91001, complete genometype II citrate synthase6e-31135
NC_003143:1233128:1251398125139812526781281Yersinia pestis CO92, complete genomecitrate synthase6e-31135
NC_008150:650899:6681346681346694141281Yersinia pestis Antiqua, complete genomecitrate synthase GltA6e-31135
NC_017265:1136000:1152728115272811540081281Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,citrate synthase GltA6e-31135
NC_017168:4155143:4173414417341441746941281Yersinia pestis A1122 chromosome, complete genometype II citrate synthase6e-31135
NC_017154:1225500:1242688124268812439681281Yersinia pestis D106004 chromosome, complete genomecitrate synthase6e-31135
NC_014029:1283500:1300595130059513018751281Yersinia pestis Z176003 chromosome, complete genomecitrate synthase6e-31135
NC_009381:2939782:2939782293978229410621281Yersinia pestis Pestoides F chromosome, complete genometype II citrate synthase6e-31135
NC_004088:3382148:3382148338214833834281281Yersinia pestis KIM, complete genomecitrate synthase6e-31135
NC_013205:854983:8709188709188720301113Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Citrate (Si)-synthase1e-30134
NC_007514:335085:3532793532793546221344Chlorobium chlorochromatii CaD3, complete genomeCitrate synthase I1e-30134
NC_009656:3817261:3828215382821538295011287Pseudomonas aeruginosa PA7 chromosome, complete genometype II citrate synthase2e-30134
NC_006831:76500:1079661079661092131248Ehrlichia ruminantium str. Gardel, complete genomeCitrate synthase3e-30133
NC_005295:95500:1282151282151294621248Ehrlichia ruminantium str. Welgevonden, complete genomecitrate synthase3e-30133
NC_006832:76500:1086141086141098611248Ehrlichia ruminantium str. Welgevonden, complete genomeCitrate synthase3e-30133
NC_017080:942416:9605659605659618451281Phycisphaera mikurensis NBRC 102666, complete genomecitrate synthase5e-30132
NC_007354:77108:1186021186021198521251Ehrlichia canis str. Jake, complete genomeCitrate synthase I7e-30132
NC_014831:2397563:2404970240497024060881119Thermaerobacter marianensis DSM 12885 chromosome, complete genomecitrate synthase8e-30132
NC_020300:675551:6972506972506985691320Bartonella australis Aust/NH1, complete genometype II citrate synthase7e-29129
NC_014910:2015627:2023960202396020252551296Alicycliphilus denitrificans BC chromosome, complete genomecitrate synthase i1e-28127
NC_015563:4773415:4785269478526947865791311Delftia sp. Cs1-4 chromosome, complete genomecitrate synthase I2e-28127
NC_010677:96470:1441481441481454071260Francisella tularensis subsp. mediasiatica FSC147, complete genomecitrate synthase I9e-28125
NC_013922:2463299:2468231246823124696761446Natrialba magadii ATCC 43099 chromosome, complete genomeCitrate synthase6e-28125
NC_008601:1733940:1751913175191317531721260Francisella tularensis subsp. novicida U112, complete genomecitrate synthase2e-27124
NC_009257:151737:1571991571991584641266Francisella tularensis subsp. tularensis WY96-3418 chromosome,citrate synthase I2e-27124
NC_007798:652317:6511576511576523531197Neorickettsia sennetsu str. Miyayama, complete genomecitrate synthase1e-27124
NC_009749:1699152:1717167171716717184321266Francisella tularensis subsp. holarctica FTA, complete genomecitrate synthase I1e-27124
NC_007880:1703346:1721274172127417225331260Francisella tularensis subsp. holarctica, complete genomecitrate synthase1e-27124
NC_008369:1702885:1720891172089117221651275Francisella tularensis subsp. holarctica OSU18, complete genomecitrate (Si)-synthase1e-27124
NC_006570:24636:7229872298735721275Francisella tularensis subsp. tularensis Schu 4, complete genomecitrate synthase1e-27124
NC_008245:66852:7231472314735881275Francisella tularensis subsp. tularensis FSC 198, complete genomecitrate synthase1e-27124
NC_016933:66854:7231672316735901275Francisella tularensis TIGB03 chromosome, complete genomeCitrate synthase (si)1e-27124
NC_016937:66854:7231672316735901275Francisella tularensis subsp. tularensis TI0902 chromosome,Citrate synthase (si)1e-27124
NC_009663:2478311:2490222249022224915051284Sulfurovum sp. NBC37-1, complete genomecitrate synthase7e-27122
NC_016599:3434996:3458682345868234600131332Owenweeksia hongkongensis DSM 17368 chromosome, complete genomecitrate (Si)-synthase2e-26120
NC_009092:1874888:1897131189713118984171287Shewanella loihica PV-4, complete genomecitrate synthase I2e-25117
NC_008278:2594387:2605458260545826065641107Frankia alni ACN14a, complete genomecitrate synthase2e-25117
NC_016845:1285435:1341074134107413423781305Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative citrate synthase2e-24114
NC_015696:517941:5659005659005671591260Francisella sp. TX077308 chromosome, complete genomecitrate synthase2e-24114
NC_017221:441948:4640694640694653611293Bifidobacterium longum subsp. longum KACC 91563 chromosome,citrate synthase2e-23110
NC_010816:2252732:2273413227341322747051293Bifidobacterium longum DJO10A, complete genomeCitrate synthase2e-23110
NC_010336:996661:1044452104445210457111260Francisella philomiragia subsp. philomiragia ATCC 25017, completeCitrate (Si)-synthase2e-23110
NC_005861:2120633:2123290212329021244501161Candidatus Protochlamydia amoebophila UWE25, complete genomeputative citrate (si)-synthase5e-23109
NC_010814:1390817:1415066141506614163881323Geobacter lovleyi SZ, complete genomeCitrate (Si)-synthase8e-23108
NC_020063:2343813:2353263235326323545491287Enterobacteriaceae bacterium strain FGI 57, complete genomecitrate synthase I, hexameric type1e-22108
NC_014931:6203872:6218451621845162195751125Variovorax paradoxus EPS chromosome, complete genomeCitrate (Si)-synthase1e-20101
NC_014931:6203872:6219657621965762208261170Variovorax paradoxus EPS chromosome, complete genomeCitrate synthase2e-1894
NC_013922:2463299:2473324247332424744571134Natrialba magadii ATCC 43099 chromosome, complete genomeCitrate (Si)-synthase6e-1892.4
NC_014924:2517068:2517068251706825182941227Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeCitrate synthase2e-1480.5
NC_014537:663216:6756046756046767521149Vulcanisaeta distributa DSM 14429 chromosome, complete genome4e-0859.7
NC_011026:3044717:3066739306673930685921854Chloroherpeton thalassium ATCC 35110, complete genomeATP-citrate lyase/succinyl-CoA ligase2e-0654.7