Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:1243122:1245365 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1245365, End: 1245868, Length: 504

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009328:2808897:281163828116382812114477Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeGAF domain-containing protein8e-46182
NC_011772:4565418:458099545809954581474480Bacillus cereus G9842, complete genomehypothetical protein3e-45180
NC_011725:4600000:461573946157394616218480Bacillus cereus B4264 chromosome, complete genomehypothetical protein3e-45180
NC_009725:2784334:278588527858852786367483Bacillus amyloliquefaciens FZB42, complete genomeYtsP1e-44178
CP002207:2452286:245384324538432454325483Bacillus atrophaeus 1942, complete genomeYtsP1e-43175
UCMB5137:2418403:241915424191542419636483Bacillus atrophaeus UCMB-5137YtsP1e-43175
NC_014639:2452286:245384324538432454325483Bacillus atrophaeus 1942 chromosome, complete genomeYtsP protein1e-43175
NC_014228:1712339:172820317282031728700498Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-41168
NC_009512:4287605:431809943180994318581483Pseudomonas putida F1, complete genomeGAF domain-containing protein-like protein1e-40165
NC_014363:427393:429626429626430141516Olsenella uli DSM 7084 chromosome, complete genomeputative GAF sensor protein3e-35147
NC_013515:1321336:132772113277211328155435Streptobacillus moniliformis DSM 12112, complete genomehypothetical protein1e-34145
NC_016609:7819243:783456478345647835040477Niastella koreensis GR20-10 chromosome, complete genomeputative GAF sensor protein2e-34144
NC_010999:1381497:139815213981521398634483Lactobacillus casei, complete genomeGAF domain-containing protein2e-30131
NC_006347:2109192:213135821313582131831474Bacteroides fragilis YCH46, complete genomeGAF domain-containing protein involved in signal transduction3e-27120
NC_016776:2161716:218086721808672181340474Bacteroides fragilis 638R, complete genomeputative GAF-domain signal transduction protein5e-27120
NC_003228:2170963:218904521890452189518474Bacteroides fragilis NCTC 9343, complete genomeputative GAF-domain signal transduction protein5e-27120
NC_016002:2453919:245795824579582458467510Pseudogulbenkiania sp. NH8B, complete genomeGAF domain-containing protein3e-26117
NC_017030:3771675:377372437737243774218495Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-24111
NC_015555:863173:884146884146884652507Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeputative GAF sensor protein2e-2098.2
NC_010003:570643:584430584430585377948Petrotoga mobilis SJ95, complete genomeputative GAF sensor protein3e-2097.4
NC_016510:871000:874567874567875022456Flavobacterium columnare ATCC 49512 chromosome, complete genomeGAF domain-containing protein4e-1270.9
NC_020156:903754:919748919748920203456Nonlabens dokdonensis DSW-6, complete genomeGAF domain protein4e-1270.5