Pre_GI: BLASTN Hits

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Query: NC_021182:4882494 Clostridium pasteurianum BC1, complete genome

Start: 4882494, End: 4908599, Length: 26106

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015687:3766000*3766000379114625147Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-61246BLASTN svgBLASTP svg
NC_003030:3763054*3763054378965126598Clostridium acetobutylicum ATCC 824, complete genome1e-61246BLASTN svgBLASTP svg
NC_014328:4546390*4546390457009623707Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-54222BLASTN svgBLASTP svg
NC_008593:37456*374566080623351Clostridium novyi NT, complete genome2e-47198BLASTN svgBLASTP svg
NC_010723:1133163*1133163115110717945Clostridium botulinum E3 str. Alaska E43, complete genome2e-38168BLASTN svgBLASTP svg
NC_010674:11702641170264119243322170Clostridium botulinum B str. Eklund 17B, complete genome2e-38168BLASTN svgBLASTP svg
NC_003366:22667572266757228574918993Clostridium perfringens str. 13, complete genome1e-30143BLASTN svgBLASTP svg
NC_004557:81362*8136210417722816Clostridium tetani E88, complete genome6e-29137BLASTN svgBLASTP svg
NC_008262:2150944*2150944216909918156Clostridium perfringens SM101, complete genome3e-28135BLASTN svgBLASTP svg
NC_008261:2481500*2481500250521723718Clostridium perfringens ATCC 13124, complete genome6e-26127BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome1e-24123BLASTN svgBLASTP svg
NC_021182:162236*16223618461322378Clostridium pasteurianum BC1, complete genome4e-24121BLASTN svgBLASTP svg
NC_021182:20135002013500203160018101Clostridium pasteurianum BC1, complete genome2e-23119BLASTN svgBLASTP svg
NC_012563:4101000*4101000412265321654Clostridium botulinum A2 str. Kyoto, complete genome2e-23119BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome6e-23117BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome6e-23117BLASTN svgBLASTP svg
NC_021182:2422226*2422226244735325128Clostridium pasteurianum BC1, complete genome4e-21111BLASTN svgBLASTP svg
NC_010516:3903867*3903867395059846732Clostridium botulinum B1 str. Okra, complete genome4e-21111BLASTN svgBLASTP svg
NC_010520:3938490*3938490397609937610Clostridium botulinum A3 str. Loch Maree, complete genome2e-19105BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_021182:2360500*2360500238564325144Clostridium pasteurianum BC1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_020291:12668851266885130737240488Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome6e-1797.6BLASTN svgBLASTP svg
NC_014393:49881274988127501003921913Clostridium cellulovorans 743B chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010520:21715842171584219449022907Clostridium botulinum A3 str. Loch Maree, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_016012:805680*80568082784122162Candidatus Arthromitus sp. SFB-rat-Yit, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013316:1225797*1225797124983024034Clostridium difficile R20291, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:10452181045218106369618479Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015275:32999233299923332126821346Clostridium lentocellum DSM 5427 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_021182:380500*38050040092720428Clostridium pasteurianum BC1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_021182:43109004310900433018019281Clostridium pasteurianum BC1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_021182:40588734058873407780118929Clostridium pasteurianum BC1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011296:102650*10265012914226493Thermodesulfovibrio yellowstonii DSM 11347, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006570:1405178*1405178142352318346Francisella tularensis subsp. tularensis Schu 4, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007880:1079634*1079634110602826395Francisella tularensis subsp. holarctica, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008245:1405000*1405000142332918330Francisella tularensis subsp. tularensis FSC 198, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008369:1083598*1083598110999126394Francisella tularensis subsp. holarctica OSU18, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010677:707881*70788173076722887Francisella tularensis subsp. mediasiatica FSC147, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_021182:40880004088000411160223603Clostridium pasteurianum BC1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010001:649000*64900066890119902Clostridium phytofermentans ISDg, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015391:1323171*1323171134609922929Carnobacterium sp. 17-4 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021182:96683996683998495918121Clostridium pasteurianum BC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018664:1699618*1699618171859918982Clostridium acidurici 9a chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010730:1724443*1724443174211517673Sulfurihydrogenibium sp. YO3AOP1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008601:1404933*1404933142455519623Francisella tularensis subsp. novicida U112, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012563:29791472979147300249023344Clostridium botulinum A2 str. Kyoto, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014328:3682000*3682000370562423625Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018664:12799501279950129986019911Clostridium acidurici 9a chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010981:1243888*1243888127707333186Wolbachia pipientis, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011661:961129*96112998426123133Dictyoglomus turgidum DSM 6724, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010516:34660003466000348809922100Clostridium botulinum B1 str. Okra, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008817:1574506*1574506159903624531Prochlorococcus marinus str. MIT 9515, complete genome3e-0661.9BLASTN svgBLASTP svg