Pre_GI: BLASTN Hits

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Query: NC_021182:4022894 Clostridium pasteurianum BC1, complete genome

Start: 4022894, End: 4041426, Length: 18533

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003030:38716583871658389490323246Clostridium acetobutylicum ATCC 824, complete genome3e-107396BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome3e-70274BLASTN svgBLASTP svg
NC_021182:380500*38050040092720428Clostridium pasteurianum BC1, complete genome5e-66260BLASTN svgBLASTP svg
NC_021182:29653952965395298850023106Clostridium pasteurianum BC1, complete genome5e-66260BLASTN svgBLASTP svg
NC_021182:29210002921000295537334374Clostridium pasteurianum BC1, complete genome1e-63252BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome2e-59238BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome7e-59236BLASTN svgBLASTP svg
NC_021182:2883716*2883716290856724852Clostridium pasteurianum BC1, complete genome4e-57230BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome2e-50208BLASTN svgBLASTP svg
NC_021182:16549031654903167678221880Clostridium pasteurianum BC1, complete genome9e-49202BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome1e-47198BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome9e-46192BLASTN svgBLASTP svg
NC_021182:10777211077721109639718677Clostridium pasteurianum BC1, complete genome2e-43184BLASTN svgBLASTP svg
NC_021182:34386013438601346026021660Clostridium pasteurianum BC1, complete genome2e-40174BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome8e-37163BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome1e-32149BLASTN svgBLASTP svg
NC_021182:3409199*3409199343177822580Clostridium pasteurianum BC1, complete genome3e-30141BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome1e-29139BLASTN svgBLASTP svg
NC_021182:1346261*1346261136580919549Clostridium pasteurianum BC1, complete genome5e-29137BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome7e-28133BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome3e-27131BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome2e-22115BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome2e-22115BLASTN svgBLASTP svg
NC_007907:51044765104476513017825703Desulfitobacterium hafniense Y51, complete genome2e-22115BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome7e-22113BLASTN svgBLASTP svg
NC_003030:303812*30381236254758736Clostridium acetobutylicum ATCC 824, complete genome1e-20109BLASTN svgBLASTP svg
NC_015687:303810*30381036254358734Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_021182:162236*16223618461322378Clostridium pasteurianum BC1, complete genome2e-19105BLASTN svgBLASTP svg
NC_008593:15131071513107153682423718Clostridium novyi NT, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_013893:54688546887972925042Staphylococcus lugdunensis HKU09-01 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_021182:2059143*2059143208239023248Clostridium pasteurianum BC1, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_013792:33893*338935284318951Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_021182:2360500*2360500238564325144Clostridium pasteurianum BC1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_005945:75451775451777374519229Bacillus anthracis str. Sterne, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_003212:28373662837366286009922734Listeria innocua Clip11262, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014328:2518081*2518081254764529565Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014388:55903*559038066924767Butyrivibrio proteoclasticus B316 chromosome 2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021182:2219286*2219286224215022865Clostridium pasteurianum BC1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014328:4546390*4546390457009623707Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014328:3682000*3682000370562423625Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012563:29791472979147300249023344Clostridium botulinum A2 str. Kyoto, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014328:24672392467239248674019502Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_021182:40588734058873407780118929Clostridium pasteurianum BC1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008262:227354*22735427081243459Clostridium perfringens SM101, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_021182:90909090909093219223103Clostridium pasteurianum BC1, complete genome9e-0660BLASTN svgBLASTP svg
NC_018515:3108755*3108755313227423520Desulfosporosinus meridiei DSM 13257 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_010520:2635750*2635750265654120792Clostridium botulinum A3 str. Loch Maree, complete genome9e-0660BLASTN svgBLASTP svg
NC_010516:127000*12700015115624157Clostridium botulinum B1 str. Okra, complete genome9e-0660BLASTN svgBLASTP svg