Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2965395 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
296539529664621068iron-only hydrogenase maturation rSAM protein HydEQuickGO ontologyBLASTP
296661729678341218putative Zn-dependent peptidaseQuickGO ontologyBLASTP
29700242970590567DJ-1 family proteinQuickGO ontologyBLASTP
297066829735532886type IIA topoisomerase DNA gyrasetopo II topoisomerase IV A subunitQuickGO ontologyBLASTP
297362129755761956type IIA topoisomerase DNA gyrasetopo II topoisomerase IV B subunitQuickGO ontologyBLASTP
29760782976458381hypothetical proteinBLASTP
297663329786602028PTS system glucose-specific IIBC componentQuickGO ontologyBLASTP
29793412979916576pyridoxal 5-phosphate synthase glutaminase subunit Pdx2QuickGO ontologyBLASTP
29799182980787870pyridoxal 5-phosphate synthase synthase subunit Pdx1QuickGO ontologyBLASTP
29817332982467735Zn-dependent hydrolase glyoxylaseQuickGO ontologyBLASTP
298318629846611476hypothetical proteinBLASTP
29851662985696531hypothetical protein
29867942987606813site-specific recombinase XerDQuickGO ontologyBLASTP
29877632988500738DNA-binding regulatory protein YebCPmpR familyQuickGO ontologyBLASTP