Pre_GI: BLASTN Hits

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Query: NC_016445:1363831 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 1363831, End: 1423917, Length: 60087

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002505:1892430*1892430192509932670Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete064360BLASTN svgBLASTP svg
NC_002505:19317501931750195259920850Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete037250BLASTN svgBLASTP svg
NC_002506:32455232455235839733846Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete03931BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete02460BLASTN svgBLASTP svg
NC_002505:23856923856927414635578Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete02452BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence02020BLASTN svgBLASTP svg
NC_005139:2201820*2201820227810176282Vibrio vulnificus YJ016 chromosome I, complete sequence01612BLASTN svgBLASTP svg
NC_011566:47096724709672473260322932Shewanella piezotolerans WP3, complete genome4e-60242BLASTN svgBLASTP svg
NC_008322:2077628*2077628211677239145Shewanella sp. MR-7, complete genome2e-49206BLASTN svgBLASTP svg
NC_004603:1115134*1115134114139026257Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete5e-47198BLASTN svgBLASTP svg
NC_013456:2528284*2528284254628518002Vibrio sp. Ex25 chromosome 1, complete genome7e-46194BLASTN svgBLASTP svg
NC_008321:1993541*1993541201934825808Shewanella sp. MR-4, complete genome1e-44190BLASTN svgBLASTP svg
NC_008577:2115440*2115440215134235903Shewanella sp. ANA-3 chromosome 1, complete sequence1e-44190BLASTN svgBLASTP svg
NC_012691:24762232476223251032334101Tolumonas auensis DSM 9187, complete genome6e-34155BLASTN svgBLASTP svg
NC_013456:2984491*2984491300234717857Vibrio sp. Ex25 chromosome 1, complete genome3e-33153BLASTN svgBLASTP svg
NC_009778:2227627*2227627228586658240Enterobacter sakazakii ATCC BAA-894, complete genome4e-32149BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete6e-31145BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-30143BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-30143BLASTN svgBLASTP svg
NC_012691:2097287*2097287211808120795Tolumonas auensis DSM 9187, complete genome2e-30143BLASTN svgBLASTP svg
NC_005139:79654679654681991523370Vibrio vulnificus YJ016 chromosome I, complete sequence1e-29141BLASTN svgBLASTP svg
NC_010067:1782998*1782998180098317986Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete6e-28135BLASTN svgBLASTP svg
NC_014121:2629075*2629075265233623262Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete6e-28135BLASTN svgBLASTP svg
NC_014366:1435785*1435785146660130817Gamma proteobacterium HdN1, complete genome6e-28135BLASTN svgBLASTP svg
NC_003197:12075971207597123259925003Salmonella typhimurium LT2, complete genome9e-27131BLASTN svgBLASTP svg
NC_003198:1117687*1117687114274925063Salmonella enterica subsp. enterica serovar Typhi str. CT18,9e-27131BLASTN svgBLASTP svg
NC_004631:1842050*1842050186312621077Salmonella enterica subsp. enterica serovar Typhi Ty2, complete9e-27131BLASTN svgBLASTP svg
NC_006905:1186895*1186895121502828134Salmonella enterica subsp. enterica serovar Choleraesuis str9e-27131BLASTN svgBLASTP svg
NC_010102:1979742*1979742200183422093Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,9e-27131BLASTN svgBLASTP svg
NC_011083:12165001216500123593619437Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-27131BLASTN svgBLASTP svg
NC_015663:3466471*3466471350514038670Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-26129BLASTN svgBLASTP svg
AC_000091:1083798*1083798110686123064Escherichia coli W3110 DNA, complete genome1e-25127BLASTN svgBLASTP svg
NC_000913:1087062*1087062110699919938Escherichia coli K12, complete genome1e-25127BLASTN svgBLASTP svg
NC_004337:1065609*1065609109071125103Shigella flexneri 2a str. 301, complete genome1e-25127BLASTN svgBLASTP svg
NC_006511:1770000*1770000179181621817Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-25127BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome1e-25127BLASTN svgBLASTP svg
NC_008258:1076922*1076922110024923328Shigella flexneri 5 str. 8401, complete genome1e-25127BLASTN svgBLASTP svg
NC_010468:2809125*2809125282748818364Escherichia coli ATCC 8739, complete genome1e-25127BLASTN svgBLASTP svg
NC_011080:12099351209935123471124777Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-25127BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-25127BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome1e-25127BLASTN svgBLASTP svg
NC_015968:1709680*1709680173221922540Enterobacter asburiae LF7a chromosome, complete genome1e-25127BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-24123BLASTN svgBLASTP svg
NC_009901:15163401516340153887622537Shewanella pealeana ATCC 700345, complete genome1e-22117BLASTN svgBLASTP svg
NC_004129:2034500*2034500206459930100Pseudomonas fluorescens Pf-5, complete genome9e-21111BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome9e-21111BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome9e-21111BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome2e-18103BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_012660:5121219*5121219514562724409Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_008255:33316133331613337748645874Cytophaga hutchinsonii ATCC 33406, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_015703:3842144*3842144386963427491Runella slithyformis DSM 19594 chromosome, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_010465:2383219*2383219240542422206Yersinia pseudotuberculosis YPIII, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_004088:2491303*2491303251808626784Yersinia pestis KIM, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_004547:1970686*1970686199651325828Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_009997:26996442699644272218322540Shewanella baltica OS195, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_012917:2921932*2921932295050128570Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_013421:3117639*3117639314038322745Pectobacterium wasabiae WPP163, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_007005:2149275*2149275217042621152Pseudomonas syringae pv. syringae B728a, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_009783:16656101665610168785322244Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence8e-1281.8BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome8e-1281.8BLASTN svgBLASTP svg
NC_009052:43357544335754435735621603Shewanella baltica OS155, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_014306:31020003102000312424122242Erwinia billingiae Eb661, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence1e-1077.8BLASTN svgBLASTP svg
NC_004459:349500*34950040074451245Vibrio vulnificus CMCP6 chromosome I, complete sequence5e-1075.8BLASTN svgBLASTP svg
NC_013446:1724000*1724000175930835309Comamonas testosteroni CNB-2, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_013446:16485561648556170768159126Comamonas testosteroni CNB-2, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_020156:86140286140287909917698Nonlabens dokdonensis DSW-6, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_004459:32439873243987327990435918Vibrio vulnificus CMCP6 chromosome I, complete sequence3e-0869.9BLASTN svgBLASTP svg
NC_005966:33348643334864335435519492Acinetobacter sp. ADP1, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_007508:1221500*1221500126063139132Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015061:3840463*3840463391463974177Rahnella sp. Y9602 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_016010:1169850*1169850119450124652Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete3e-0869.9BLASTN svgBLASTP svg
NC_014217:4597426*4597426462121223787Starkeya novella DSM 506 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008577:45335744533574455327719704Shewanella sp. ANA-3 chromosome 1, complete sequence1e-0767.9BLASTN svgBLASTP svg
NC_009667:1371924*1371924140112629203Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence5e-0765.9BLASTN svgBLASTP svg
NC_008787:685401*68540171140226002Campylobacter jejuni subsp. jejuni 81-176, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013592:32630053263005329243329429Dickeya dadantii Ech586, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010725:750911*75091177963428724Methylobacterium populi BJ001, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_002516:3079850*3079850310675226903Pseudomonas aeruginosa PAO1, complete genome7e-0661.9BLASTN svgBLASTP svg